Neil Fortner 1d946c7028 Implement internally concurrent multithreading for chunk dataset I/O reads (#6645) ...

Added 3 new functions to support this: H5TSset_internal_threads(), H5Pset_io_threads(), and H5Pget_io_threads().

This feature internally parallelizes read operations on chunked datasets. H5TSset_internal_threads() is used to enable the feature globally, while H5Pset_io_threads() can be used to disable the feature on a per-operation basis. These functions are only available when the library is configured with HDF5_ENABLE_CONCURRENCY=ON. When performing an internally threaded read, the library will concurrently read from disk, unfilter, and scatter to memory all chunks in a read operation on a chunked dataset. Currently each of these sub-operations is serialized (protected by a mutex), so there is not yet likely to be any performance improvement.

2026-09-15 10:51:57 -05:00

..

API

Consistent extension for C++ (#6214)

2026-02-20 08:59:27 -06:00

testfiles

Fix CVE-2026-19025 (Reject chunked datasets with mismatched chunk/dspace rank at open time) (#6508)

2026-08-28 13:49:02 -05:00

accum_swmr_reader.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

accum.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

app_ref.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

atomic_reader.c

Fix POSIX header guard to include _WIN32 for Intel icx on Windows (#6244)

2026-03-01 07:19:05 -06:00

atomic_writer.c

Fix POSIX header guard to include _WIN32 for Intel icx on Windows (#6244)

2026-03-01 07:19:05 -06:00

AtomicWriterReader.txt

spelling fixes (#1561)

2022-03-31 10:42:30 -05:00

big.c

Add support for 64 bit chunks, including 64 bit chunk dimensions (#5965)

2025-11-04 11:42:24 -06:00

bittests.c

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2024-10-18 21:13:04 -07:00

btree2.c

Add new -testexpress option to testframe testing framework (#5286)

2025-01-31 20:11:48 -06:00

cache_api.c

Add new -testexpress option to testframe testing framework (#5286)

2025-01-31 20:11:48 -06:00

cache_common.c

test/cache_api: avoid false rpt_fcn pointer mismatch on Windows (#6274)

2026-03-10 16:14:46 -05:00

cache_common.h

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

cache_image.c

Fix cache image testing issues and re-enable testing (#6311)

2026-03-27 11:29:18 -05:00

cache_logging.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

cache_tagging.c

Change default nslots value for chunk cache to 8191 (#5956)

2025-10-31 14:48:05 -05:00

cache.c

Add new -testexpress option to testframe testing framework (#5286)

2025-01-31 20:11:48 -06:00

chunk_info.c

fix: zlib-ng build error on mingw (#6402)

2026-05-08 16:37:20 -05:00

CMakeLists.txt

✨[Feature] Digital Signature Verification for HDF5 Plugins (#6198)

2026-05-06 09:35:19 -05:00

CMakePassthroughVOLTests.cmake

CMake: Fix Fortran cross-compilation support

2026-02-13 14:45:02 -06:00

CMakeTests.cmake

Fix CVE-2026-19025 (Reject chunked datasets with mismatched chunk/dspace rank at open time) (#6508)

2026-08-28 13:49:02 -05:00

CMakeVFDTests.cmake

CMake: Fix Fortran cross-compilation support

2026-02-13 14:45:02 -06:00

cmpd_dset.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

cmpd_dtransform.c

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2024-10-18 21:13:04 -07:00

cork.c

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2024-10-18 21:13:04 -07:00

cross_read.c

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2024-10-18 21:13:04 -07:00

dangle.c

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2024-10-18 21:13:04 -07:00

del_many_dense_attrs.c

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2024-10-18 21:13:04 -07:00

direct_chunk.c

fix: zlib-ng build error on mingw (#6402)

2026-05-08 16:37:20 -05:00

dsets.c

Implement internally concurrent multithreading for chunk dataset I/O reads (#6645)

2026-09-15 10:51:57 -05:00

dt_arith.c

Fix some undefined behavior from casting in dt_arith.c (#6456)

2026-06-26 15:46:12 -05:00

dtransform.c

Implement internally concurrent multithreading for chunk dataset I/O reads (#6645)

2026-09-15 10:51:57 -05:00

dtypes.c

Add predefined datatype for FP4 format (#6122)

2025-12-31 11:44:08 -06:00

earray.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

efc.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

enc_dec_plist_cross_platform.c

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2024-10-18 21:13:04 -07:00

enc_dec_plist.c

Change default page buffer size to 64MiB when using ROS3 driver (#5685)

2025-08-06 23:04:10 -05:00

enum.c

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2024-10-18 21:13:04 -07:00

err_compat.c

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2024-10-18 21:13:04 -07:00

error_test.c

Fix memory leaks and ID reference counting in H5E code (#6607)

2026-08-20 09:42:57 -05:00

event_set.c

Integrate API tests with testing framework (#5133)

2024-11-26 07:34:52 -06:00

evict_on_close.c

Make test/evict_on_close.c FILENAMES static (#5989)

2025-11-07 11:51:12 -06:00

extend.c

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2024-10-18 21:13:04 -07:00

external_common.c

Fix minor Windows warnings (#5021)

2024-10-28 05:54:16 -07:00

external_common.h

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2024-10-18 21:13:04 -07:00

external_env.c

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2024-10-18 21:13:04 -07:00

external_fname.h

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2024-10-18 21:13:04 -07:00

external.c

fix for cray compiler failing test (#5347)

2025-03-03 14:11:00 -06:00

farray.c

chore: decapitalize Fixed Array (#5659)

2025-07-15 18:20:13 +02:00

fheap.c

Add new -testexpress option to testframe testing framework (#5286)

2025-01-31 20:11:48 -06:00

file_image.c

Refactor warning macros (#5432)

2025-05-23 11:46:40 -05:00

filenotclosed.c

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2024-10-18 21:13:04 -07:00

fillval.c

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2024-10-18 21:13:04 -07:00

filter_fail.c

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2024-10-18 21:13:04 -07:00

filter_plugin1_dsets.c

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2024-10-18 21:13:04 -07:00

filter_plugin2_dsets.c

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2024-10-18 21:13:04 -07:00

filter_plugin3_dsets.c

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2024-10-18 21:13:04 -07:00

filter_plugin4_groups.c

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2024-10-18 21:13:04 -07:00

filter_plugin.c

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2024-10-18 21:13:04 -07:00

flush1.c

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2024-10-18 21:13:04 -07:00

flush2.c

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2024-10-18 21:13:04 -07:00

flushrefresh.c

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2024-10-18 21:13:04 -07:00

flushrefreshTest.cmake

Rework Fortran configure to allow cross compile overrides (#5720)

2025-10-12 17:30:46 -05:00

freespace.c

Fix several issues uncovered by CVE-2025-7067 (#5938)

2025-11-11 11:52:20 -06:00

gen_bad_chunk.c

Fix CVE-2026-19025 (Reject chunked datasets with mismatched chunk/dspace rank at open time) (#6508)

2026-08-28 13:49:02 -05:00

gen_bad_compound.c

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2024-10-18 21:13:04 -07:00

gen_bad_offset.c

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2024-10-18 21:13:04 -07:00

gen_bad_ohdr.c

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2024-10-18 21:13:04 -07:00

gen_bogus.c

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2024-10-18 21:13:04 -07:00

gen_bounds.c

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2024-10-18 21:13:04 -07:00

gen_cross.c

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2024-10-18 21:13:04 -07:00

gen_deflate.c

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2024-10-18 21:13:04 -07:00

gen_file_image.c

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2024-10-18 21:13:04 -07:00

gen_filespace.c

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2024-10-18 21:13:04 -07:00

gen_filters.c

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2024-10-18 21:13:04 -07:00

gen_mergemsg.c

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2024-10-18 21:13:04 -07:00

gen_new_array.c

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2024-10-18 21:13:04 -07:00

gen_new_fill.c

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2024-10-18 21:13:04 -07:00

gen_new_group.c

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2024-10-18 21:13:04 -07:00

gen_new_mtime.c

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2024-10-18 21:13:04 -07:00

gen_new_super.c

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2024-10-18 21:13:04 -07:00

gen_noencoder.c

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2024-10-18 21:13:04 -07:00

gen_nullspace.c

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2024-10-18 21:13:04 -07:00

gen_old_array.c

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2024-10-18 21:13:04 -07:00

gen_old_group.c

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2024-10-18 21:13:04 -07:00

gen_old_layout.c

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2024-10-18 21:13:04 -07:00

gen_old_mtime.c

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2024-10-18 21:13:04 -07:00

gen_plist.c

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2024-10-18 21:13:04 -07:00

gen_sizes_lheap.c

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2024-10-18 21:13:04 -07:00

gen_specmetaread.c

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2024-10-18 21:13:04 -07:00

gen_udlinks.c

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2024-10-18 21:13:04 -07:00

genall5.c

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2024-10-18 21:13:04 -07:00

genall5.h

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2024-10-18 21:13:04 -07:00

getname.c

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2024-10-18 21:13:04 -07:00

gheap.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

h5test.c

Re-write ROS3 VFD S3 backend to use AWS' C S3 library (#5548)

2025-05-29 17:51:29 -05:00

h5test.h

Re-write ROS3 VFD S3 backend to use AWS' C S3 library (#5548)

2025-05-29 17:51:29 -05:00

H5srcdir_str.h.in

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2024-10-18 21:13:04 -07:00

H5srcdir.h

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2024-10-18 21:13:04 -07:00

hdfs.c

Add new multithreaded concurrency configuration (#5015)

2024-12-19 01:35:21 -08:00

hyperslab.c

Fix more undefined behavior issues (#6330)

2026-03-31 14:14:18 -05:00

io_perf.c

Enable data sieving for chunks that can't be cached (#6111)

2026-01-23 10:58:11 -06:00

istore.c

build(haiku): make chunk_dims static in test/istore.c (#6049)

2025-12-01 13:16:51 -06:00

lheap.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

links_env.c

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2024-10-18 21:13:04 -07:00

links.c

Fixes buffer underflow (#6143)

2026-01-26 18:07:23 -06:00

mdset.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

mf.c

Fix several issues uncovered by CVE-2025-7067 (#5938)

2025-11-11 11:52:20 -06:00

mirror_vfd.c

Fix codespell issues (#5256)

2025-01-21 17:36:27 -06:00

mount.c

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2024-10-18 21:13:04 -07:00

mtime.c

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2024-10-18 21:13:04 -07:00

ntypes.c

Add predefined datatype for FP4 format (#6122)

2025-12-31 11:44:08 -06:00

null_vfd_plugin.c

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2024-10-18 21:13:04 -07:00

null_vfd_plugin.h

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2024-10-18 21:13:04 -07:00

null_vol_connector.c

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2024-10-18 21:13:04 -07:00

null_vol_connector.h

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2024-10-18 21:13:04 -07:00

objcopy_ref.c

Refactor warning macros (#5432)

2025-05-23 11:46:40 -05:00

objcopy.c

Refactor warning macros (#5432)

2025-05-23 11:46:40 -05:00

ohdr.c

check object header message size after decoding its header (#6589)

2026-09-12 06:07:49 -05:00

onion.c

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2024-10-18 21:13:04 -07:00

page_buffer.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

POSIX_Order_Write_Test_Report.docx

Moved remaining SWMR-related test files to develop.

2017-01-26 14:34:12 -05:00

POSIX_Order_Write_Test_Report.pdf

Moved remaining SWMR-related test files to develop.

2017-01-26 14:34:12 -05:00

reserved.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

ros3.c

Fix value returned by H5Pget_fapl_ros3_block_caching() (#6602)

2026-08-14 15:39:01 -05:00

rtree.c

Fix zero-element reads on virtual dsets with r-trees (#6083)

2025-12-12 09:24:09 -06:00

s3comms.c

Add documentation and s3proxy testing for ROS3 VFD (#5560)

2025-06-19 16:22:49 -05:00

select_io_dset.c

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2024-10-18 21:13:04 -07:00

set_extent.c

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2024-10-18 21:13:04 -07:00

ShellTests.cmake

Mark several CMake variables as advanced (#6321)

2026-03-27 11:30:23 -05:00

space_overflow.c

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2024-10-18 21:13:04 -07:00

stab.c

Change default file format to 1.8 (#5949)

2025-10-30 15:26:12 -05:00

swmr_addrem_writer.c

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2024-10-18 21:13:04 -07:00

swmr_common.c

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2024-10-18 21:13:04 -07:00

swmr_common.h

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2024-10-18 21:13:04 -07:00

swmr_generator.c

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2024-10-18 21:13:04 -07:00

SWMR_POSIX_Order_UG.txt

Fixed Spelling Errors (#1166)

2021-12-07 08:27:29 -06:00

swmr_reader.c

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2024-10-18 21:13:04 -07:00

swmr_remove_reader.c

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2024-10-18 21:13:04 -07:00

swmr_remove_writer.c

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2024-10-18 21:13:04 -07:00

swmr_sparse_reader.c

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2024-10-18 21:13:04 -07:00

swmr_sparse_writer.c

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2024-10-18 21:13:04 -07:00

swmr_start_write.c

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2024-10-18 21:13:04 -07:00

SWMR_UseCase_UG.txt

Fixed Spelling Errors (#1166)

2021-12-07 08:27:29 -06:00

swmr_writer.c

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2024-10-18 21:13:04 -07:00

swmr.c

Change default file format to 1.8 (#5949)

2025-10-30 15:26:12 -05:00

tapi_version_default.c

Default versioned API functions to earliest version for older API settings (#6280)

2026-04-07 11:06:32 -05:00

tarray.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

tattr.c

Fix NULL pointer access when H5A_operator2_t is NULL (#6541)

2026-07-21 14:21:38 -04:00

tcheck_version.c

Semantic versioning update (#5944)

2025-11-04 05:11:46 -06:00

tchecksum.c

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2025-01-08 13:33:00 -06:00

tconfig.c

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2025-01-08 13:33:00 -06:00

tcoords.c

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2025-01-08 13:33:00 -06:00

test_flush_refresh.sh.in

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2024-10-18 21:13:04 -07:00

test_plugin_signature.c

✨[Feature] Digital Signature Verification for HDF5 Plugins (#6198)

2026-05-06 09:35:19 -05:00

test_swmr.pwsh.in

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2024-10-18 21:13:04 -07:00

test_swmr.sh.in

test(swmr): remove test directory before creating a new one (#6404)

2026-05-18 09:39:47 -05:00

test_use_cases.sh.in

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2024-10-18 21:13:04 -07:00

test_vds_swmr.pwsh.in

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2024-10-18 21:13:04 -07:00

test_vds_swmr.sh.in

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2024-10-18 21:13:04 -07:00

testframe.c

Move TestAlarmOn()/TestAlarmOff() back into PerformTests() (#5307)

2025-02-10 15:23:54 -06:00

testframe.h

Add new -testexpress option to testframe testing framework (#5286)

2025-01-31 20:11:48 -06:00

testhdf5.c

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testhdf5.h

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2025-01-08 13:33:00 -06:00

testmeta.c

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2024-10-18 21:13:04 -07:00

tfile.c

Fixes buffer underflow (#6143)

2026-01-26 18:07:23 -06:00

tgenprop.c

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2025-01-08 13:33:00 -06:00

th5_system.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

th5o.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

th5s.c

Fix segfault in H5S__get_select_hyper_blocklist() (#5353)

2025-03-18 11:06:36 -05:00

tid.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

timer.c

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2024-10-18 21:13:04 -07:00

titerate.c

Fix NULL pointer access when H5A_operator2_t is NULL (#6541)

2026-07-21 14:21:38 -04:00

tmeta.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

tmisc.c

Add support for 64 bit chunks, including 64 bit chunk dimensions (#5965)

2025-11-04 11:42:24 -06:00

trefer_deprec.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

trefer_shutdown.c

Rename HD(f)printf() to (f)printf() (#3194)

2023-06-28 08:31:32 -07:00

trefer.c

Fixes buffer underflow (#6143)

2026-01-26 18:07:23 -06:00

trefstr.c

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2025-01-08 13:33:00 -06:00

tselect.c

Harden selection decoding (#6525)

2026-07-17 13:04:11 -05:00

tskiplist.c

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2025-01-08 13:33:00 -06:00

tsohm.c

reject SOHM list message count exceeding list_max (#6499)

2026-07-14 13:09:56 -05:00

ttime.c

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2025-01-08 13:33:00 -06:00

ttsafe_acreate.c

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ttsafe_atomic.c

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ttsafe_attr_vlen.c

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ttsafe_cancel.c

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ttsafe_dcreate.c

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ttsafe_develop.c

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ttsafe_error_stacks.c

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2025-01-08 13:33:00 -06:00

ttsafe_error.c

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2025-01-08 13:33:00 -06:00

ttsafe_rec_rwlock.c

Add new -testexpress option to testframe testing framework (#5286)

2025-01-31 20:11:48 -06:00

ttsafe_rwlock.c

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2025-01-08 13:33:00 -06:00

ttsafe_semaphore.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

ttsafe_thread_id.c

Fix codespell issues (#5256)

2025-01-21 17:36:27 -06:00

ttsafe_thread_pool.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

ttsafe.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

ttsafe.h

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2025-01-08 13:33:00 -06:00

tunicode.c

Skip unicode tests for specific VFDs (#5823)

2025-09-15 11:42:54 -05:00

tvlstr.c

Remove const from testing parameters in testframe framework (#5214)

2025-01-08 13:33:00 -06:00

tvltypes.c

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2025-01-08 13:33:00 -06:00

twriteorder.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

unlink.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

unregister.c

Refactor allocation of API context (#4942)

2024-10-24 10:09:22 -07:00

use_append_chunk_mirror.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

use_append_chunk.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

use_append_mchunks.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

use_common.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

use_disable_mdc_flushes.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

use.h

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vds_env.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vds_swmr_gen.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vds_swmr_reader.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vds_swmr_writer.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vds_swmr.h

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vds.c

Implement internally concurrent multithreading for chunk dataset I/O reads (#6645)

2026-09-15 10:51:57 -05:00

vfd_plugin.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vfd.c

Change default file format to 1.8 (#5949)

2025-10-30 15:26:12 -05:00

vol_plugin.c

Renamed COPYING to LICENSE (#4978)

2024-10-18 21:13:04 -07:00

vol.c

Fix checking of HDF5_VOL_CONNECTOR env. var. in some tests (#6073)

2025-12-01 11:21:19 -06:00