Commit Graph
59 Commits
Author SHA1 Message Date
Quincey Koziol c8b87fa320 Improve handling of copying of dynamic libraries and clean them up after (#1681)
test finishes.
2022-04-24 09:59:12 -05:00
Allen Byrne 03c3a54695 Develop clang format java (#1653) 2022-04-19 13:08:09 -05:00
Allen Byrne 2f34c433dc Update the java slf4j logging jars to latest 1.7.33 (#1369) 2022-01-18 07:44:11 -06:00
f859cb732b Fixed Spelling Errors (#1166)
* fixed missed closing of a dataset

* fixed missed closing of a dataset

* fixed typo in error return

* Committing clang-format changes

* minor edits

* code format

* Committing clang-format changes

* code format

* minor edit

* switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging

* Committing clang-format changes

* changed size_i in printf to reflect the I/O.

* Committing clang-format changes

* Fixed seg fault with xlf on BE with -qintsize=8

* fixed error function string

* spelling corrections via codespell, added new spell check github actions

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* work around for https://github.com/codespell-project/codespell/issues/2137

* misc

* added missing file

* misc

* misc.

* misc

* switch to using Codespell with GitHub Actions

* misc.

* misc.

* fixed more sp errors

* Fix new typos found by codespell.

* fixed proceed with precede

* fixed variable in fortran test

* fixed minnum

* updated spelling list

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
2021-12-07 08:27:29 -06:00
Allen Byrne 216bff5778 #386 copyright corrections for java folder (#389)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction

* Update supported platforms

* Revert whitespace changes

* Correct whitespace

* Changes from PR#3

* HDFFV-11213 added option to control gcc10 warnings diagnostics

* HDFFV-11212 Use the new references correctly in JNI utility and tests

* format source

* Fix typo

* Add new test file

* HDFFV-11212 - update test and remove unused arg

* Minor non-space formatting changes

* Use H5I_INVALID_ID instead of "-1"

* source formatting

* add missing testfile, update jni function

* Undo commit of debug code

* remove mislocated file

* Fix h5repack test for handling of fapls and id close

* Update h5diff test files usage text

* HDFFV-11212 add new ref tests for JNI export dataset

* src format update

* Remove blank line typo

* src format typo

* long double requires %Lg

* Another long double foramt specifer S.B. %Lg

* issue with t128bit test

* Windows issue with h5dump and type.

* Fix review issues

* refactor function nesting and fix error checks

* format fixes

* Remove untested functions and javadoc quiet comments

* Restore TRY block.

* Change string append errors to memory exception

* revert to H5_JNI_FATAL_ERROR - support functions need work

* Add assertion error for h5util functions

* remove duplicate function

* format fix

* Revert HD function error handling

* Update copyright comments

* GH #386 java folder copyright corrections

* Whitespace
2021-02-26 09:27:15 -06:00
Allen Byrne c7ffe683e5 Primary change is HDFFV-11212 - new refs and JNI (#372)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction

* Update supported platforms

* Revert whitespace changes

* Correct whitespace

* Changes from PR#3

* HDFFV-11213 added option to control gcc10 warnings diagnostics

* HDFFV-11212 Use the new references correctly in JNI utility and tests

* format source

* Fix typo

* Add new test file

* HDFFV-11212 - update test and remove unused arg

* Minor non-space formatting changes

* Use H5I_INVALID_ID instead of "-1"

* source formatting

* add missing testfile, update jni function

* Undo commit of debug code

* remove mislocated file

* Fix h5repack test for handling of fapls and id close

* Update h5diff test files usage text

* HDFFV-11212 add new ref tests for JNI export dataset

* src format update

* Remove blank line typo

* src format typo

* long double requires %Lg

* Another long double foramt specifer S.B. %Lg

* issue with t128bit test

* Windows issue with h5dump and type.

* Fix review issues

* refactor function nesting and fix error checks

* format fixes

* Remove untested functions and javadoc quiet comments

* Restore TRY block.

* Change string append errors to memory exception

* revert to H5_JNI_FATAL_ERROR - support functions need work

* Add assertion error for h5util functions

* remove duplicate function

* format fix

* Revert HD function error handling

* Update copyright comments
2021-02-25 15:12:57 -06:00
Larry Knox 2ea165efd0 Update license url part2 (#333)
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
    file - files not in src or test.
2021-02-17 08:52:36 -06:00
Larry Knox f50fd0cc07 Modify temporary rpath for testing in java example scripts. (#230) 2020-12-29 15:43:49 -06:00
Michel Zou 0db1fe81d5 CMake: MINGW implies WIN32 2020-10-30 16:09:28 +01:00
Quincey Koziol 9e5dbf6906 Trim trailing whitespace 2020-04-20 18:12:00 -05:00
Allen Byrne 666205a55f TRILAB-142 Change minimum CMake version to 3.12 2020-02-21 16:16:06 -06:00
Dana Robinson a92c735c9b Squashed commit of the token_refactoring branch: 2020-01-16 13:29:34 -08:00
Allen Byrne 7022a3380c HDFFV-11001 need to qualify all by parallel or serial types 2020-01-15 12:28:53 -06:00
Allen Byrne a0ae5e9b89 HDFFV-11001 Add fine control over testing 2020-01-15 11:38:06 -06:00
Allen Byrne aa8c7b31d7 small syntax changes 2019-09-19 16:32:40 -05:00
Jacob Smith 2e5cd3d2b2 Fix compiler warnings with diabled ROS3 and HDFS VFDs.
Fix misuse of [HD]strncpy and [HD]snprintf.
Minor formatting changes.
Fix test cleanup issue with java groups example.
2019-08-14 15:36:45 -05:00
Allen Byrne fbc06ff9b8 Use generator expr to get correct name 2019-07-22 16:23:38 -05:00
Allen Byrne 4d3f52ac97 Correct java load library name access 2019-07-18 13:03:07 -05:00
Allen Byrne 7ba562a820 HDFFV-10845 fix configure check and PATHs 2019-07-17 11:58:03 -05:00
Allen Byrne 8eadaf3408 Change how name is retrieved 2019-07-08 13:59:35 -05:00
Allen Byrne 3dd7137430 HDFFV-10581 remove special name checking 2019-07-08 13:46:25 -05:00
Allen Byrne 58e6e3e102 HDFFV-10703 macro vars need quotes 2019-02-15 16:04:06 -06:00
Allen Byrne 122b63a5a2 HDFFV-10703 Update CMake commands to latest standard 2019-02-15 15:48:24 -06:00
Allen Byrne cd35778542 Correct names 2018-08-30 08:38:28 -05:00
Allen Byrne 370db827ee Call new function 2018-08-30 08:29:21 -05:00
Allen Byrne ff13ed67a9 Fix typo 2018-08-28 12:08:06 -05:00
Allen Byrne 27af9a7922 HD prefix and whitespace 2018-08-28 10:54:54 -05:00
Allen Byrne a02414cc24 Revert testfile FILE change 2018-08-23 21:27:32 -05:00
Allen Byrne c9b37b93e9 change FILE path 2018-08-23 21:22:32 -05:00
Allen Byrne 510950623a Add testfiles to data copy 2018-08-23 17:26:33 -05:00
Allen Byrne 958c7bd833 Same changes needed for examples as test 2018-08-23 16:30:13 -05:00
Allen Byrne 792771d52a Update Java util lib, Refactor H5D write VL to match read 2018-06-27 17:53:47 -05:00
Allen Byrne 6c82c49dd5 TRILABS-20 set a compiler name on all project commands 2018-04-20 10:11:55 -05:00
Allen Byrne 46f2a2a432 TRILABS-19 Initial conversion of include_directories to targets 2018-04-17 15:57:58 -05:00
Allen Byrne 24c62ba7fe Change CMake min to 3.10 2018-03-09 12:32:06 -06:00
Allen Byrne b36bad53d9 Inc CMake min, Add new tests, rework test CMake files 2018-02-27 12:57:07 -06:00
Allen Byrne 6ca95c512a HDFFV-10385 rework java names 2018-01-17 10:27:00 -06:00
Allen Byrne 0291c09075 HDFFV-10385 Use OUTPUT_NAME property instead of CMAKE_BUILD_TYPE 2018-01-16 16:08:52 -06:00
Allen Byrne 19c18e44ed Revert CMAKE_BUILD_TYPE for matches - need to redesign 2018-01-12 14:17:04 -06:00
Allen Byrne be42e04791 HDFFV-10385 refactor CMAKE_BUILD_TYPE usage 2018-01-09 09:56:28 -06:00
Allen Byrne 4f9e47650a Fix STREQUAL if commands. 2017-10-02 12:39:15 -05:00
Allen Byrne 5c5533d7fd Change name for test results table 2017-09-20 14:16:31 -05:00
Allen Byrne d901d3402a Add chekexe and chklog generation to tests 2017-09-20 09:32:03 -05:00
Larry Knox 89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Allen Byrne 2562ec3a4b Update CMake files and formatting 2017-03-01 14:47:53 -06:00
Allen Byrne 556ff06975 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'bd85e57904f1f943774bb99ea5e8b0d074db0edb':
  tools/test/h5diff/testh5diff.sh.in:          Add code to delete copies of test .h5 files copied from          tools/testfiles/vds to tools/test/h5diff/testfiles when running          "make check" for an in-source build.
2017-01-13 10:57:26 -06:00
lrknox 8452976de5 tools/test/h5diff/testh5diff.sh.in:
Add code to delete copies of test .h5 files copied from
         tools/testfiles/vds to tools/test/h5diff/testfiles when running
         "make check" for an in-source build.

    tools/test/misc/testh5repart.sh.in:
         Change the name of the temporary test directory from "testfiles"
         which is also used for 2 h5mkgrp test files under source control to
         "testrepart" to avoid deleting source controlled files when running
         "make check" in the source directory.

    Fix test scripts that remove source-controlled files during "make check" when run in-source.
    Fix test scripts that don't remove test files because they add files to test directories but don't remove them if the build directories are the same as the source directory.

    Fix any test source file or Makefile.am files for tests that leave data files are removed by neither "make check" nor "make distclean".
2017-01-12 22:20:11 -06:00
Allen Byrne e1bcae8a6a Update cmake min version and cmake command convention 2017-01-10 17:10:03 -06:00
Allen Byrne 53d3a619f8 Change examples to match junit test 2016-12-01 15:59:03 -06:00
Allen Byrne dd9caf37d2 Merge test output file clearing into runTest.cmake 2016-10-03 15:34:11 -05:00