mirror of
https://github.com/HDFGroup/hdf5.git
synced 2026-09-25 04:09:44 +03:00
Allen Byrne
b754dcb8f2
FFM build requires Java 25, Jextract 25. Generates FFM bindings during configure. JNI is default when the requirements are not met or can be forced. Presets added for maven and FFM - JNI is default selection. Enhanced Maven options will work with either JNI or FFM New Workflows for testing and maven uploads. Extensive documentation changes for java.
293 lines
10 KiB
YAML
293 lines
10 KiB
YAML
name: hdf5 examples bintest runs
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# Triggers the workflow on a call from another workflow
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on:
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workflow_call:
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inputs:
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build_mode:
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description: "release vs. debug build"
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required: true
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type: string
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save_binary:
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description: "binary-ext-name or missing"
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required: true
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default: "skip"
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type: string
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java_version:
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description: "Java version to use for testing (19, 21, 24, 25, latest)"
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required: false
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default: "19"
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type: string
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permissions:
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contents: read
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jobs:
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test_binary_win:
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# Windows w/ MSVC
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#
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name: "Windows MSVC Binary Test"
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runs-on: windows-latest
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steps:
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- name: Install Dependencies (Windows)
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run: choco install ninja
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- name: Set up JDK ${{ inputs.java_version }}
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uses: actions/setup-java@v5
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with:
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java-version: |
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${{
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inputs.save_binary == 'ffm' && '25' ||
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inputs.java_version == 'latest' && '24' ||
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inputs.java_version
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}}
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distribution: ${{ inputs.save_binary == 'ffm' && 'oracle' || 'temurin' }}
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- name: Enable Developer Command Prompt
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uses: ilammy/msvc-dev-cmd@v1.13.0
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# Get files created by cmake-ctest script
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- name: Get published binary (Windows)
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uses: actions/download-artifact@018cc2cf5baa6db3ef3c5f8a56943fffe632ef53 # v6.0.0
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with:
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name: zip-vs2022_cl-${{ inputs.build_mode }}-${{ inputs.save_binary }}-binary
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path: ${{ github.workspace }}/hdf5
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- name: Uncompress hdf5 binary (Win)
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working-directory: ${{ github.workspace }}/hdf5
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run: 7z x HDF5-*-win64.zip
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shell: bash
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- name: List files for the space (Win)
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run: |
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ls -l ${{ github.workspace }}
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ls -l ${{ github.workspace }}/hdf5
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- name: create hdf5 location (Win)
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working-directory: ${{ github.workspace }}/hdf5
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run: |
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New-Item -Path "${{ github.workspace }}/HDF_Group/HDF5" -ItemType Directory
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Copy-Item -Path "${{ github.workspace }}/hdf5/HDF*/*" -Destination "${{ github.workspace }}/HDF_Group/HDF5" -Recurse
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shell: pwsh
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- name: List files for the space (Win)
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run: ls -l ${{ github.workspace }}/HDF_Group/HDF5
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- name: set hdf5lib name
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id: set-hdf5lib-name
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run: |
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HDF5DIR="${{ github.workspace }}/HDF_Group/HDF5"
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echo "HDF5_ROOT=$HDF5DIR$FILE_NAME_HDF5" >> $GITHUB_OUTPUT
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echo "HDF5_PLUGIN_PATH=$HDF5_ROOT/lib/plugin" >> $GITHUB_OUTPUT
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shell: bash
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- name: List files for the binaries (Win)
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run: |
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ls -l ${{ github.workspace }}/HDF_Group/HDF5
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- name: using powershell
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shell: pwsh
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run: Get-Location
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- name: List files for the space (Windows)
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run: |
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Get-ChildItem -Path ${{ github.workspace }}
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Get-ChildItem -Path ${{ runner.workspace }}
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shell: pwsh
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- name: Run CTest (Windows)
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env:
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HDF5_ROOT: ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}
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HDF5_PLUGIN_PATH: ${{ steps.set-hdf5lib-name.outputs.HDF5_PLUGIN_PATH }}
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run: |
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cd "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/HDF5Examples"
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cmake --workflow --preset=ci-StdShar-MSVC --fresh
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shell: bash
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test_binary_linux:
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# Linux (Ubuntu) w/ gcc
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#
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name: "Ubuntu gcc Binary Test"
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runs-on: ubuntu-latest
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steps:
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- name: Install Dependencies (Linux)
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run: |
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sudo apt-get update
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sudo apt-get install ninja-build doxygen graphviz
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- name: Set up JDK ${{ inputs.java_version }}
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uses: actions/setup-java@v5
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with:
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java-version: |
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${{
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inputs.save_binary == 'ffm' && '25' ||
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inputs.java_version == 'latest' && '24' ||
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inputs.java_version
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}}
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distribution: ${{ inputs.save_binary == 'ffm' && 'oracle' || 'temurin' }}
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- name: Get published binary (Linux)
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uses: actions/download-artifact@018cc2cf5baa6db3ef3c5f8a56943fffe632ef53 # v6.0.0
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with:
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name: tgz-ubuntu-2404_gcc-${{ inputs.build_mode }}-${{ inputs.save_binary }}-binary
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path: ${{ github.workspace }}
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- name: Uncompress hdf5 binary (Linux)
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run: |
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cd "${{ github.workspace }}"
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tar -zxvf ${{ github.workspace }}/HDF5-*-Linux.tar.gz --strip-components 1
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- name: set hdf5lib name
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id: set-hdf5lib-name
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run: |
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HDF5DIR=${{ github.workspace }}/HDF_Group/HDF5/
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FILE_NAME_HDF5=$(ls ${{ github.workspace }}/HDF_Group/HDF5)
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echo "HDF5_ROOT=$HDF5DIR$FILE_NAME_HDF5" >> $GITHUB_OUTPUT
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echo "HDF5_PLUGIN_PATH=$HDF5_ROOT/lib/plugin" >> $GITHUB_OUTPUT
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- name: List files for the binaries (Linux)
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run: |
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ls -l ${{ github.workspace }}/HDF_Group/HDF5
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- name: List files for the space (Linux)
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run: |
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ls -l ${{ github.workspace }}
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ls ${{ runner.workspace }}
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- name: Run CTest (Linux)
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env:
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HDF5_ROOT: ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}
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HDF5_PLUGIN_PATH: ${{ steps.set-hdf5lib-name.outputs.HDF5_PLUGIN_PATH }}
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run: |
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cd "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/HDF5Examples"
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cmake --workflow --preset=ci-StdShar-GNUC --fresh
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shell: bash
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test_binary_mac_latest:
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# MacOS w/ Clang
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#
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name: "MacOS Clang Binary Test"
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runs-on: macos-latest
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steps:
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- name: Install Dependencies (MacOS_latest)
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run: brew install ninja doxygen
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- name: Set up JDK ${{ inputs.java_version }}
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uses: actions/setup-java@v5
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with:
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java-version: |
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${{
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inputs.save_binary == 'ffm' && '25' ||
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inputs.java_version == 'latest' && '24' ||
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inputs.java_version
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}}
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distribution: ${{ inputs.save_binary == 'ffm' && 'oracle' || 'temurin' }}
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- name: Get published binary (MacOS_latest)
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uses: actions/download-artifact@018cc2cf5baa6db3ef3c5f8a56943fffe632ef53 # v6.0.0
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with:
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name: tgz-macos14_clang-${{ inputs.build_mode }}-${{ inputs.save_binary }}-binary
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path: ${{ github.workspace }}
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- name: Uncompress hdf5 binary (MacOS_latest)
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run: |
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cd "${{ github.workspace }}"
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tar -zxvf ${{ github.workspace }}/HDF5-*-Darwin.tar.gz --strip-components 1
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- name: set hdf5lib name
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id: set-hdf5lib-name
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run: |
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HDF5DIR=${{ github.workspace }}/HDF_Group/HDF5/
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FILE_NAME_HDF5=$(ls ${{ github.workspace }}/HDF_Group/HDF5)
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echo "HDF5_ROOT=$HDF5DIR$FILE_NAME_HDF5" >> $GITHUB_OUTPUT
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echo "HDF5_PLUGIN_PATH=$HDF5_ROOT/lib/plugin" >> $GITHUB_OUTPUT
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- name: List files for the binaries (MacOS_latest)
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run: |
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ls -l ${{ github.workspace }}/HDF_Group/HDF5
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- name: List files for the space (MacOS_latest)
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run: |
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ls ${{ github.workspace }}
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ls ${{ runner.workspace }}
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# symlinks the compiler executables to a common location
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- name: Setup GNU Fortran
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uses: fortran-lang/setup-fortran@v1
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id: setup-fortran
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with:
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compiler: gcc
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version: 14
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- name: Run CTest (MacOS_latest)
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id: run-ctest
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env:
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HDF5_ROOT: ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}
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HDF5_PLUGIN_PATH: ${{ steps.set-hdf5lib-name.outputs.HDF5_PLUGIN_PATH }}
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run: |
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cd "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/HDF5Examples"
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cmake --workflow --preset=ci-StdShar-macos-Clang --fresh
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shell: bash
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test_h5cc_linux:
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# Linux (Ubuntu) w/ gcc
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#
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name: "Ubuntu h5cc Binary Test"
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runs-on: ubuntu-latest
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steps:
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- name: Install Dependencies (Linux)
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run: |
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sudo apt-get update
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sudo apt-get install ninja-build doxygen graphviz
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- name: Set up JDK ${{ inputs.java_version }}
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uses: actions/setup-java@v5
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with:
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java-version: |
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${{
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inputs.save_binary == 'ffm' && '25' ||
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inputs.java_version == 'latest' && '24' ||
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inputs.java_version
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}}
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distribution: ${{ inputs.save_binary == 'ffm' && 'oracle' || 'temurin' }}
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- name: Get published binary (Linux)
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uses: actions/download-artifact@018cc2cf5baa6db3ef3c5f8a56943fffe632ef53 # v6.0.0
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with:
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name: tgz-ubuntu-2404_gcc-${{ inputs.build_mode }}-${{ inputs.save_binary }}-binary
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path: ${{ github.workspace }}
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- name: Uncompress hdf5 binary (Linux)
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run: |
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cd "${{ github.workspace }}"
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tar -zxvf ${{ github.workspace }}/HDF5-*-Linux.tar.gz --strip-components 1
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- name: set hdf5lib name
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id: set-hdf5lib-name
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run: |
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HDF5DIR=${{ github.workspace }}/HDF_Group/HDF5/
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FILE_NAME_HDF5=$(ls ${{ github.workspace }}/HDF_Group/HDF5)
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echo "HDF5_ROOT=$HDF5DIR$FILE_NAME_HDF5" >> $GITHUB_OUTPUT
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echo "HDF5_PLUGIN_PATH=$HDF5_ROOT/lib/plugin" >> $GITHUB_OUTPUT
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- name: List files for the binaries (Linux)
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run: |
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ls -l ${{ github.workspace }}/HDF_Group/HDF5
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- name: List files for the space (Linux)
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run: |
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ls -l ${{ github.workspace }}
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ls ${{ runner.workspace }}
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- name: Run testpc (Linux)
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env:
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HDF5_HOME: ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}
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HDF5_PLUGIN_PATH: ${{ steps.set-hdf5lib-name.outputs.HDF5_PLUGIN_PATH }}
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run: |
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mkdir "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/build"
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cd "${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/HDF5Examples"
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sh ./test-pc.sh ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/HDF5Examples ${{ steps.set-hdf5lib-name.outputs.HDF5_ROOT }}/share/build .
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shell: bash
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