mirror of
https://github.com/HDFGroup/hdf5.git
synced 2026-09-25 04:09:44 +03:00
Allen Byrne
b754dcb8f2
FFM build requires Java 25, Jextract 25. Generates FFM bindings during configure. JNI is default when the requirements are not met or can be forced. Presets added for maven and FFM - JNI is default selection. Enhanced Maven options will work with either JNI or FFM New Workflows for testing and maven uploads. Extensive documentation changes for java.
465 lines
14 KiB
Java
465 lines
14 KiB
Java
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the LICENSE file, which can be found at the root of the source code *
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* distribution tree, or in https://www.hdfgroup.org/licenses. *
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* If you do not have access to either file, you may request a copy from *
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* help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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package test;
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import static org.junit.Assert.assertTrue;
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import static org.junit.Assert.fail;
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import hdf.hdf5lib.H5;
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import hdf.hdf5lib.HDF5Constants;
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import hdf.hdf5lib.exceptions.HDF5DataspaceInterfaceException;
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import hdf.hdf5lib.exceptions.HDF5FunctionArgumentException;
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import hdf.hdf5lib.exceptions.HDF5LibraryException;
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import org.junit.After;
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import org.junit.Before;
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import org.junit.Rule;
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import org.junit.Test;
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import org.junit.rules.TestName;
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public class TestH5Sbasic {
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@Rule
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public TestName testname = new TestName();
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@Before
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public void checkOpenIDs()
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{
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assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
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System.out.print(testname.getMethodName());
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}
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@After
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public void nextTestName()
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{
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System.out.println();
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Sclose_invalid() throws Throwable
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{
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long sid = H5.H5Sclose(-1);
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Screate_invalid() throws Throwable
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{
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H5.H5Screate(-1);
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Sget_simple_extent_type_invalid() throws Throwable
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{
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H5.H5Sget_simple_extent_type(-1);
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}
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@Test
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public void testH5Screate_scalar()
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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int class_type = -1;
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_SCALAR);
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assertTrue("H5.H5Screate_scalar", sid > 0);
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class_type = H5.H5Sget_simple_extent_type(sid);
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assertTrue("H5.H5Screate_scalar: type", class_type == HDF5Constants.H5S_SCALAR);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Screate: " + err);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test
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public void testH5Screate_null()
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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int class_type = -1;
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_NULL);
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assertTrue("H5.H5Screate_null", sid > 0);
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class_type = H5.H5Sget_simple_extent_type(sid);
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assertTrue("H5.H5Screate_null: type", class_type == HDF5Constants.H5S_NULL);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Screate: " + err);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test(expected = NullPointerException.class)
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public void testH5Screate_simple_dims_null() throws Throwable
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{
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H5.H5Screate_simple(2, (long[])null, null);
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Screate_simple_rank_invalid() throws Throwable
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{
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long dims[] = {5, 5};
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H5.H5Screate_simple(-1, dims, null);
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Screate_simple_dims_invalid() throws Throwable
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{
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long dims[] = {2, 2};
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H5.H5Screate_simple(5, dims, null);
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}
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@Test(expected = HDF5LibraryException.class)
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public void testH5Screate_simple_dims_exceed() throws Throwable
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{
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long dims[] = {0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
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18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 35};
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H5.H5Screate_simple(35, dims, null);
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}
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// H5Screate_simple was changed to allow a dim of 0
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// @Ignore(expected = HDF5LibraryException.class)
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// public void testH5Screate_simple_dims_zero() {
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// long dims[] = {0, 0};
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// H5.H5Screate_simple(2, dims, null);
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// }
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@Test
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public void testH5Screate_simple()
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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int class_type = -1;
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int rank = 2;
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long dims[] = {5, 5};
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long maxdims[] = {10, 10};
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try {
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sid = H5.H5Screate_simple(rank, dims, maxdims);
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assertTrue("H5.H5Screate_simple", sid > 0);
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class_type = H5.H5Sget_simple_extent_type(sid);
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assertTrue("H5.H5Screate_simple: type", class_type == HDF5Constants.H5S_SIMPLE);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Screate_simple: " + err);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test
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public void testH5Screate_simple_unlimted()
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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int class_type = -1;
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int rank = 2;
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long dims[] = {5, 5};
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long maxdims[] = {HDF5Constants.H5S_UNLIMITED, HDF5Constants.H5S_UNLIMITED};
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try {
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sid = H5.H5Screate_simple(rank, dims, maxdims);
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assertTrue("H5.H5Screate_simple", sid > 0);
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class_type = H5.H5Sget_simple_extent_type(sid);
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assertTrue("H5.H5Screate_simple: type", class_type == HDF5Constants.H5S_SIMPLE);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Screate_simple: " + err);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test
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public void testH5Screate_simple_unlimted_1d()
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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int class_type = -1;
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int rank = 1;
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long dims[] = {5};
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long maxdims[] = {HDF5Constants.H5S_UNLIMITED};
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try {
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sid = H5.H5Screate_simple(rank, dims, maxdims);
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assertTrue("H5.H5Screate_simple", sid > 0);
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class_type = H5.H5Sget_simple_extent_type(sid);
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assertTrue("H5.H5Screate_simple: type", class_type == HDF5Constants.H5S_SIMPLE);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Screate_simple: " + err);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test
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public void testH5Screate_simple_max_default()
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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int rank = 2;
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long dims[] = {5, 5};
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try {
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sid = H5.H5Screate_simple(rank, dims, null);
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assertTrue("H5.H5Screate_simple_max_default", sid > 0);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Screate_simple: " + err);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test
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public void testH5Screate_simple_extent()
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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int rank = 2;
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long dims[] = {5, 5};
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long maxdims[] = {10, 10};
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
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assertTrue("H5.H5Screate_simple_extent", sid > 0);
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H5.H5Sset_extent_simple(sid, rank, dims, maxdims);
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}
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catch (Throwable err) {
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err.printStackTrace();
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fail("H5.H5Screate: " + err);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Sencode_invalid() throws Throwable
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{
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H5.H5Sencode(-1);
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}
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@Test(expected = NullPointerException.class)
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public void testH5Sdecode_null() throws Throwable
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{
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H5.H5Sdecode(null);
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Sget_regular_hyperslab_invalid() throws Throwable
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{
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long q_start[] = new long[2];
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long q_stride[] = new long[2];
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long q_count[] = new long[2];
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long q_block[] = new long[2];
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H5.H5Sget_regular_hyperslab(-1, q_start, q_stride, q_count, q_block);
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}
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@Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
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public void testH5Sselect_copy_invalid() throws Throwable
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{
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H5.H5Sselect_copy(-1, -1);
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}
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@Test(expected = hdf.hdf5lib.exceptions.HDF5DataspaceInterfaceException.class)
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public void testH5Sselect_shape_same_invalid() throws Throwable
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{
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H5.H5Sselect_shape_same(-1, -1);
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Sselect_adjust_invalid() throws Throwable
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{
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long offset[][] = {{0, 1}, {2, 4}, {5, 6}};
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H5.H5Sselect_adjust(-1, offset);
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Sselect_adjust_rank_offset() throws Throwable
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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long offset[][] = {{0, 1}, {2, 4}, {5, 6}};
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
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assertTrue("H5.H5Screate_simple_extent", sid > 0);
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H5.H5Sselect_adjust(sid, offset);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test(expected = HDF5DataspaceInterfaceException.class)
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public void testH5Sselect_intersect_block_invalid() throws Throwable
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{
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long start[] = new long[2];
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long end[] = new long[2];
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H5.H5Sselect_intersect_block(-1, start, end);
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Sselect_intersect_block_rank_start() throws Throwable
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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long start[] = new long[2];
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long end[] = new long[3];
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
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assertTrue("H5.H5Screate_simple_extent", sid > 0);
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H5.H5Sselect_intersect_block(sid, start, end);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test(expected = HDF5FunctionArgumentException.class)
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public void testH5Sselect_intersect_block_rank_end() throws Throwable
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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long start[] = new long[3];
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long end[] = new long[2];
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
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assertTrue("H5.H5Screate_simple_extent", sid > 0);
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H5.H5Sselect_intersect_block(sid, start, end);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test(expected = hdf.hdf5lib.exceptions.HDF5DataspaceInterfaceException.class)
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public void testH5Sselect_project_intersection_invalid() throws Throwable
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{
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H5.H5Sselect_project_intersection(-1, -1, -1);
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}
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@Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
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public void testH5Scombine_hyperslab_invalid() throws Throwable
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{
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long start[] = new long[2];
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long count[] = new long[2];
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H5.H5Scombine_hyperslab(-1, 0, start, null, count, null);
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}
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@Test(expected = NullPointerException.class)
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public void testH5Scombine_hyperslab_null_start() throws Throwable
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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long start[] = null;
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long stride[] = null;
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long count[] = new long[2];
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long block[] = null;
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
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assertTrue("H5.H5Screate_simple_extent", sid > 0);
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H5.H5Scombine_hyperslab(sid, 0, start, stride, count, block);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test(expected = NullPointerException.class)
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public void testH5Scombine_hyperslab_null_count() throws Throwable
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{
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long sid = HDF5Constants.H5I_INVALID_HID;
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long start[] = new long[2];
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long stride[] = null;
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long count[] = null;
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long block[] = null;
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try {
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sid = H5.H5Screate(HDF5Constants.H5S_SIMPLE);
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assertTrue("H5.H5Screate_simple_extent", sid > 0);
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H5.H5Scombine_hyperslab(sid, 0, start, stride, count, block);
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}
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finally {
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try {
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H5.H5Sclose(sid);
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}
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catch (Exception ex) {
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}
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}
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}
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@Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
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public void testH5Smodify_select_invalid() throws Throwable
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{
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H5.H5Smodify_select(-1, 0, -1);
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}
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@Test(expected = hdf.hdf5lib.exceptions.HDF5FunctionArgumentException.class)
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public void testH5Scombine_select_invalid() throws Throwable
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{
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H5.H5Scombine_select(-1, 0, -1);
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}
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}
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