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hdf5/java/src-jni/test/TestH5Pfapl.java
T
Allen Byrne b754dcb8f2 Move Java wrappers to FFM using jextract and java 25 (#5957) 
FFM build requires Java 25, Jextract 25.
Generates FFM bindings during configure.
JNI is default when the requirements are not met or can be forced.
Presets added for maven and FFM - JNI is default selection.
Enhanced Maven options will work with either JNI or FFM
New Workflows for testing and maven uploads.
Extensive documentation changes for java.
2025-11-04 14:03:06 -06:00

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the LICENSE file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
package test;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
import java.io.File;
import java.text.DecimalFormat;
import java.text.NumberFormat;
import hdf.hdf5lib.H5;
import hdf.hdf5lib.HDF5Constants;
import hdf.hdf5lib.exceptions.HDF5Exception;
import hdf.hdf5lib.exceptions.HDF5LibraryException;
import hdf.hdf5lib.exceptions.HDF5PropertyListInterfaceException;
import hdf.hdf5lib.structs.H5AC_cache_config_t;
import org.junit.After;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.TestName;
public class TestH5Pfapl {
@Rule
public TestName testname = new TestName();
private static final String H5_FILE = "testPf.h5";
private static final String H5_LOG_FILE = "testPf.log";
private static final String H5_FAMILY_FILE = "testPf%05d";
private static final String H5_MULTI_FILE = "testPfmulti";
private static char MULTI_LETTERS[] = {'X', 's', 'b', 'r', 'g', 'l', 'o'};
private static final int DIM_X = 4;
private static final int DIM_Y = 6;
private static final int DIMF_X = 12;
private static final int DIMF_Y = 18;
long H5fid = HDF5Constants.H5I_INVALID_HID;
long H5dsid = HDF5Constants.H5I_INVALID_HID;
long H5did = HDF5Constants.H5I_INVALID_HID;
long H5Fdsid = HDF5Constants.H5I_INVALID_HID;
long H5Fdid = HDF5Constants.H5I_INVALID_HID;
long[] H5dims = {DIM_X, DIM_Y};
long fapl_id = HDF5Constants.H5I_INVALID_HID;
long plapl_id = HDF5Constants.H5I_INVALID_HID;
long dapl_id = HDF5Constants.H5I_INVALID_HID;
long plist_id = HDF5Constants.H5I_INVALID_HID;
long btplist_id = HDF5Constants.H5I_INVALID_HID;
long[] H5Fdims = {DIMF_X, DIMF_Y};
double windchillF[][] = {{36.0, 31.0, 25.0, 19.0, 13.0, 7.0, 1.0, -5.0, -11.0, -16.0, -22.0, -28.0, -34.0,
-40.0, -46.0, -52.0, -57.0, -63.0},
{34.0, 27.0, 21.0, 15.0, 9.0, 3.0, -4.0, -10.0, -16.0, -22.0, -28.0, -35.0,
-41.0, -47.0, -53.0, -59.0, -66.0, -72.0},
{32.0, 25.0, 19.0, 13.0, 6.0, 0.0, -7.0, -13.0, -19.0, -26.0, -32.0, -39.0,
-45.0, -51.0, -58.0, -64.0, -71.0, -77.0},
{30.0, 24.0, 17.0, 11.0, 4.0, -2.0, -9.0, -15.0, -22.0, -29.0, -35.0, -42.0,
-48.0, -55.0, -61.0, -68.0, -74.0, -81.0},
{29.0, 23.0, 16.0, 9.0, 3.0, -4.0, -11.0, -17.0, -24.0, -31.0, -37.0, -44.0,
-51.0, -58.0, -64.0, -71.0, -78.0, -84.0},
{28.0, 22.0, 15.0, 8.0, 1.0, -5.0, -12.0, -19.0, -26.0, -33.0, -39.0, -46.0,
-53.0, -60.0, -67.0, -73.0, -80.0, -87.0},
{28.0, 21.0, 14.0, 7.0, 0.0, -7.0, -14.0, -21.0, -27.0, -34.0, -41.0, -48.0,
-55.0, -62.0, -69.0, -76.0, -82.0, -89.0},
{27.0, 20.0, 13.0, 6.0, -1.0, -8.0, -15.0, -22.0, -29.0, -36.0, -43.0, -50.0,
-57.0, -64.0, -71.0, -78.0, -84.0, -91.0},
{26.0, 19.0, 12.0, 5.0, -2.0, -9.0, -16.0, -23.0, -30.0, -37.0, -44.0, -51.0,
-58.0, -65.0, -72.0, -79.0, -86.0, -93.0},
{26.0, 19.0, 12.0, 4.0, -3.0, -10.0, -17.0, -24.0, -31.0, -38.0, -45.0, -52.0,
-60.0, -67.0, -74.0, -81.0, -88.0, -95.0},
{25.0, 18.0, 11.0, 4.0, -3.0, -11.0, -18.0, -25.0, -32.0, -39.0, -46.0, -54.0,
-61.0, -68.0, -75.0, -82.0, -89.0, -97.0},
{25.0, 17.0, 10.0, 3.0, -4.0, -11.0, -19.0, -26.0, -33.0, -40.0, -48.0, -55.0,
-62.0, -69.0, -76.0, -84.0, -91.0, -98.0}};
private final void _deleteFile(String filename)
{
File file = null;
try {
file = new File(filename);
}
catch (Throwable err) {
}
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
}
}
}
private final void _deleteLogFile()
{
File file = null;
try {
file = new File(H5_LOG_FILE);
}
catch (Throwable err) {
}
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
}
}
}
private final void _deleteFamilyFile()
{
File file = null;
for (int indx = 0;; indx++) {
java.text.DecimalFormat myFormat = new java.text.DecimalFormat("00000");
try {
file = new File("test" + myFormat.format(Integer.valueOf(indx)) + ".h5");
}
catch (Throwable err) {
}
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
}
}
else
return;
}
}
private final void _deleteMultiFile()
{
File file = null;
for (int indx = 1; indx < 7; indx++) {
try {
file = new File(H5_MULTI_FILE + "-" + MULTI_LETTERS[indx] + ".h5");
}
catch (Throwable err) {
}
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
}
}
}
}
private final long _createDataset(long fid, long dsid, String name, long dapl)
{
long did = HDF5Constants.H5I_INVALID_HID;
try {
did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
HDF5Constants.H5P_DEFAULT, dapl);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5.H5Dcreate: " + err);
}
assertTrue("TestH5Pfapl._createDataset: ", did > 0);
return did;
}
private final void _createFloatDataset()
{
try {
H5Fdsid = H5.H5Screate_simple(2, H5Fdims, null);
H5Fdid =
H5.H5Dcreate(H5fid, "dsfloat", HDF5Constants.H5T_NATIVE_FLOAT, H5Fdsid,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5.H5Dcreate: " + err);
}
assertTrue("TestH5Pfapl._createFloatDataset: ", H5Fdid > 0);
try {
H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
}
catch (Throwable err) {
err.printStackTrace();
}
}
private final void _createH5multiFileDS()
{
try {
H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5Pfapl.createH5file: " + err);
}
assertTrue("TestH5Pfapl.createH5file: _createDataset: ", H5did > 0);
try {
H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
}
catch (Throwable err) {
err.printStackTrace();
}
}
private final void _createH5File(long fapl)
{
try {
H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, fapl);
H5dsid = H5.H5Screate_simple(2, H5dims, null);
H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5Pfapl.createH5file: " + err);
}
assertTrue("TestH5Pfapl.createH5file: H5.H5Fcreate: ", H5fid > 0);
assertTrue("TestH5Pfapl.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
assertTrue("TestH5Pfapl.createH5file: _createDataset: ", H5did > 0);
try {
H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
}
catch (Throwable err) {
err.printStackTrace();
}
}
private final void _createH5familyFile(long fapl)
{
try {
H5fid = H5.H5Fcreate(H5_FAMILY_FILE + ".h5", HDF5Constants.H5F_ACC_TRUNC,
HDF5Constants.H5P_DEFAULT, fapl);
H5dsid = H5.H5Screate_simple(2, H5dims, null);
H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5Pfapl.createH5file: " + err);
}
assertTrue("TestH5Pfapl.createH5file: H5.H5Fcreate: ", H5fid > 0);
assertTrue("TestH5Pfapl.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
assertTrue("TestH5Pfapl.createH5file: _createDataset: ", H5did > 0);
try {
H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
}
catch (Throwable err) {
err.printStackTrace();
}
}
private final void _createH5multiFile(long fapl)
{
try {
H5fid = H5.H5Fcreate(H5_MULTI_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, fapl);
H5dsid = H5.H5Screate_simple(2, H5dims, null);
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5Pfapl.createH5file: " + err);
}
assertTrue("TestH5Pfapl.createH5file: H5.H5Fcreate: ", H5fid > 0);
assertTrue("TestH5Pfapl.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
try {
H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
}
catch (Throwable err) {
err.printStackTrace();
}
}
public void deleteH5file() { _deleteFile(H5_FILE); }
public void deleteH5familyfile() { _deleteFamilyFile(); }
public void deleteH5multifile() { _deleteMultiFile(); }
@Before
public void createFileAccess() throws NullPointerException, HDF5Exception
{
assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
System.out.print(testname.getMethodName());
try {
fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5Pfapl.createFileAccess: " + err);
}
assertTrue(fapl_id > 0);
try {
plapl_id = H5.H5Pcreate(HDF5Constants.H5P_LINK_ACCESS);
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5Pfapl.createFileAccess: " + err);
}
assertTrue(plapl_id > 0);
try {
plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
btplist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5Pfapl.createFileAccess: " + err);
}
assertTrue(plist_id > 0);
assertTrue(btplist_id > 0);
assertTrue(dapl_id > 0);
}
@After
public void deleteFileAccess() throws HDF5LibraryException
{
if (fapl_id > 0)
try {
H5.H5Pclose(fapl_id);
}
catch (Exception ex) {
}
if (plapl_id > 0)
try {
H5.H5Pclose(plapl_id);
}
catch (Exception ex) {
}
if (dapl_id > 0)
try {
H5.H5Pclose(dapl_id);
}
catch (Exception ex) {
}
if (plist_id > 0)
try {
H5.H5Pclose(plist_id);
}
catch (Exception ex) {
}
if (btplist_id > 0)
try {
H5.H5Pclose(btplist_id);
}
catch (Exception ex) {
}
if (H5Fdsid > 0)
try {
H5.H5Sclose(H5Fdsid);
}
catch (Exception ex) {
}
if (H5Fdid > 0)
try {
H5.H5Dclose(H5Fdid);
}
catch (Exception ex) {
}
if (H5dsid > 0)
try {
H5.H5Sclose(H5dsid);
}
catch (Exception ex) {
}
if (H5did > 0)
try {
H5.H5Dclose(H5did);
}
catch (Exception ex) {
}
if (H5fid > 0)
try {
H5.H5Fclose(H5fid);
}
catch (Exception ex) {
}
System.out.println();
}
@Test
public void testH5Pget_libver_bounds()
{
int ret_val = -1;
int[] libver = new int[2];
try {
ret_val = H5.H5Pget_libver_bounds(fapl_id, libver);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_libver_bounds: " + err);
}
assertTrue("testH5Pget_libver_bounds", ret_val >= 0);
// Check the Earliest Version of the library
assertEquals(HDF5Constants.H5F_LIBVER_V18, libver[0]);
// Check the Latest Version of the library
assertEquals(HDF5Constants.H5F_LIBVER_LATEST, libver[1]);
}
@Test
public void testH5Pset_libver_bounds()
{
int ret_val = -1;
int low = HDF5Constants.H5F_LIBVER_EARLIEST;
int high = HDF5Constants.H5F_LIBVER_LATEST;
int[] libver = new int[2];
try {
ret_val = H5.H5Pset_libver_bounds(fapl_id, low, high);
H5.H5Pget_libver_bounds(fapl_id, libver);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_libver_bounds: " + err);
}
assertTrue("testH5Pset_libver_bounds", ret_val >= 0);
// Check the Earliest Version of the library
assertEquals(HDF5Constants.H5F_LIBVER_EARLIEST, libver[0]);
// Check the Latest Version of the library
assertEquals(HDF5Constants.H5F_LIBVER_LATEST, libver[1]);
}
@Test(expected = HDF5LibraryException.class)
public void testH5Pset_elink_fapl_NegativeID() throws Throwable
{
H5.H5Pset_elink_fapl(-1, fapl_id);
}
@Test
public void testH5Pset_elink_fapl()
{
int ret_val = -1;
try {
ret_val = H5.H5Pset_elink_fapl(plapl_id, fapl_id);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_elink_fapl: " + err);
}
assertTrue("H5Pset_elink_fapl", ret_val >= 0);
}
@Test
public void testH5Pget_elink_fapl()
{
long ret_val_id = HDF5Constants.H5I_INVALID_HID;
try {
ret_val_id = H5.H5Pget_elink_fapl(plapl_id);
assertTrue("H5Pget_elink_fapl", ret_val_id >= 0);
assertEquals(HDF5Constants.H5P_DEFAULT, ret_val_id);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_elink_fapl: " + err);
}
finally {
if (ret_val_id > 0)
try {
H5.H5Pclose(ret_val_id);
}
catch (Exception ex) {
}
}
}
@Test
public void testH5P_elink_fapl()
{
long ret_val_id = HDF5Constants.H5I_INVALID_HID;
try {
H5.H5Pset_elink_fapl(plapl_id, fapl_id);
ret_val_id = H5.H5Pget_elink_fapl(plapl_id);
assertTrue("H5P_elink_fapl", ret_val_id >= 0);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_elink_fapl: " + err);
}
finally {
if (ret_val_id > 0)
try {
H5.H5Pclose(ret_val_id);
}
catch (Exception ex) {
}
}
}
@Test
public void testH5P_elink_file_cache_size()
{
long elink_fapl_id = HDF5Constants.H5I_INVALID_HID;
int efc_size = 0;
try {
H5.H5Pset_elink_fapl(plapl_id, fapl_id);
elink_fapl_id = H5.H5Pget_elink_fapl(plapl_id);
assertTrue("H5P_elink_file_cache_size", elink_fapl_id >= 0);
try {
efc_size = H5.H5Pget_elink_file_cache_size(elink_fapl_id);
assertTrue("H5P_elink_file_cache_size default", efc_size == 0);
}
catch (UnsupportedOperationException err) {
System.out.println(err.getMessage());
}
try {
efc_size = 8;
H5.H5Pset_elink_file_cache_size(elink_fapl_id, efc_size);
efc_size = H5.H5Pget_elink_file_cache_size(elink_fapl_id);
assertTrue("H5P_elink_file_cache_size 8", efc_size == 8);
}
catch (UnsupportedOperationException err) {
System.out.println(err.getMessage());
}
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_elink_file_cache_size: " + err);
}
finally {
if (elink_fapl_id > 0)
try {
H5.H5Pclose(elink_fapl_id);
}
catch (Exception ex) {
}
}
}
@Test
public void testH5P_btree_ratios()
{
double[] left = {0.1};
double[] middle = {0.5};
double[] right = {0.7};
try {
H5.H5Pset_btree_ratios(plist_id, left[0], middle[0], right[0]);
H5.H5Pget_btree_ratios(plist_id, left, middle, right);
assertTrue("H5P_btree_ratios", left[0] == 0.1);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_btree_ratios: " + err);
}
}
@Test
public void testH5P_edc_check()
{
int ret_val_id = -1;
try {
ret_val_id = H5.H5Pget_edc_check(plist_id);
assertTrue("H5P_edc_check", ret_val_id == HDF5Constants.H5Z_ENABLE_EDC);
H5.H5Pset_edc_check(plist_id, HDF5Constants.H5Z_DISABLE_EDC);
ret_val_id = H5.H5Pget_edc_check(plist_id);
assertTrue("H5P_edc_check", ret_val_id == HDF5Constants.H5Z_DISABLE_EDC);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_edc_check: " + err);
}
}
@Test
public void testH5P_fclose_degree()
{
int ret_val_id = -1;
try {
ret_val_id = H5.H5Pget_fclose_degree(fapl_id);
assertTrue("H5Pget_fclose_degree default", ret_val_id == HDF5Constants.H5F_CLOSE_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_fclose_degree: default " + err);
}
try {
H5.H5Pset_fclose_degree(fapl_id, HDF5Constants.H5F_CLOSE_STRONG);
ret_val_id = H5.H5Pget_fclose_degree(fapl_id);
assertTrue("H5Pget_fclose_degree", ret_val_id == HDF5Constants.H5F_CLOSE_STRONG);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_fclose_degree: H5F_CLOSE_STRONG " + err);
}
try {
H5.H5Pset_fclose_degree(fapl_id, HDF5Constants.H5F_CLOSE_SEMI);
ret_val_id = H5.H5Pget_fclose_degree(fapl_id);
assertTrue("H5Pget_fclose_degree", ret_val_id == HDF5Constants.H5F_CLOSE_SEMI);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_fclose_degree: H5F_CLOSE_SEMI " + err);
}
}
@Test
public void testH5P_alignment()
{
long[] align = {0, 0};
try {
H5.H5Pget_alignment(fapl_id, align);
assertTrue("H5P_alignment threshold default", align[0] == 1);
assertTrue("H5P_alignment alignment default", align[1] == 1);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_alignment: default " + err);
}
try {
align[0] = 1024;
align[1] = 2048;
H5.H5Pset_alignment(fapl_id, align[0], align[1]);
H5.H5Pget_alignment(fapl_id, align);
assertTrue("H5P_alignment threshold", align[0] == 1024);
assertTrue("H5P_alignment alignment", align[1] == 2048);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_alignment: " + err);
}
}
@Test
public void testH5P_meta_block_size()
{
long meta_size = 0;
try {
meta_size = H5.H5Pget_meta_block_size(fapl_id);
assertTrue("H5P_meta_block_size default", meta_size == 2048);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_meta_block_size: default " + err);
}
try {
meta_size = 4096;
H5.H5Pset_meta_block_size(fapl_id, meta_size);
meta_size = H5.H5Pget_meta_block_size(fapl_id);
assertTrue("H5P_meta_block_size 4096", meta_size == 4096);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_meta_block_size: " + err);
}
}
@Test
public void testH5P_small_data_block_size()
{
long align = 0;
try {
align = H5.H5Pget_small_data_block_size(fapl_id);
assertTrue("H5P_small_data_block_size default", align == 2048);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_small_data_block_size: default " + err);
}
try {
align = 4096;
H5.H5Pset_small_data_block_size(fapl_id, align);
align = H5.H5Pget_small_data_block_size(fapl_id);
assertTrue("H5P_small_data_block_size 4096", align == 4096);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_small_data_block_size: " + err);
}
}
@Test
public void testH5P_hyper_vector_size()
{
long[] align = {0};
try {
H5.H5Pget_hyper_vector_size(plist_id, align);
assertTrue("H5P_hyper_vector_size default", align[0] == 1024);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_hyper_vector_size: default " + err);
}
try {
align[0] = 4096;
H5.H5Pset_hyper_vector_size(plist_id, align[0]);
H5.H5Pget_hyper_vector_size(plist_id, align);
assertTrue("H5P_hyper_vector_size 4096", align[0] == 4096);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_hyper_vector_size: " + err);
}
}
@Test
public void testH5P_cache()
{
long[] rdcc_nelmts = {0};
long[] rdcc_nbytes = {0};
double[] rdcc_w0 = {0};
try {
H5.H5Pget_cache(fapl_id, null, rdcc_nelmts, rdcc_nbytes, rdcc_w0);
assertTrue("H5P_cache default", rdcc_nelmts[0] == 8191);
assertTrue("H5P_cache default", rdcc_nbytes[0] == (8 * 1024 * 1024));
assertTrue("H5P_cache default", rdcc_w0[0] == 0.75);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_cache: default " + err);
}
try {
rdcc_nelmts[0] = 4096;
H5.H5Pset_cache(fapl_id, 0, rdcc_nelmts[0], rdcc_nbytes[0], rdcc_w0[0]);
H5.H5Pget_cache(fapl_id, null, rdcc_nelmts, rdcc_nbytes, rdcc_w0);
assertTrue("H5P_cache 4096", rdcc_nelmts[0] == 4096);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_cache: " + err);
}
}
@Test
public void testH5P_chunk_cache()
{
long[] rdcc_nslots = {0};
long[] rdcc_nbytes = {0};
double[] rdcc_w0 = {0};
try {
H5.H5Pget_chunk_cache(dapl_id, rdcc_nslots, rdcc_nbytes, rdcc_w0);
assertTrue("H5P_chunk_cache default", rdcc_nslots[0] == 8191);
assertTrue("H5P_chunk_cache default", rdcc_nbytes[0] == (8 * 1024 * 1024));
assertTrue("H5P_chunk_cache default", rdcc_w0[0] == 0.75);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_chunk_cache: default " + err);
}
try {
rdcc_nslots[0] = 4096;
H5.H5Pset_chunk_cache(dapl_id, rdcc_nslots[0], rdcc_nbytes[0], rdcc_w0[0]);
H5.H5Pget_chunk_cache(dapl_id, rdcc_nslots, rdcc_nbytes, rdcc_w0);
assertTrue("H5P_chunk_cache 4096", rdcc_nslots[0] == 4096);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_chunk_cache: " + err);
}
}
@Test
public void testH5P_sieve_buf_size()
{
long buf_size = 0;
try {
buf_size = H5.H5Pget_sieve_buf_size(fapl_id);
assertTrue("H5P_sieve_buf_size default", buf_size == (64 * 1024));
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_sieve_buf_size: default " + err);
}
try {
buf_size = 4096;
H5.H5Pset_sieve_buf_size(fapl_id, buf_size);
buf_size = H5.H5Pget_sieve_buf_size(fapl_id);
assertTrue("H5P_sieve_buf_size 4096", buf_size == 4096);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_sieve_buf_size: " + err);
}
}
@Test
public void testH5P_gc_references()
{
boolean ret_val_id = false;
try {
H5.H5Pset_gc_references(fapl_id, true);
ret_val_id = H5.H5Pget_gc_references(fapl_id);
assertTrue("H5P_gc_references", ret_val_id);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_gc_references: " + err);
}
}
@Test
public void testH5Pget_mdc_config()
{
H5AC_cache_config_t cache_config = null;
try {
cache_config = H5.H5Pget_mdc_config(fapl_id);
assertTrue("H5Pget_mdc_config",
cache_config.version == HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_mdc_config: " + err);
}
}
@Test
public void testH5Pset_mdc_config()
{
H5AC_cache_config_t cache_config = null;
try {
cache_config = H5.H5Pget_mdc_config(fapl_id);
assertTrue("H5Pset_mdc_config",
cache_config.version == HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_mdc_config: " + err);
}
try {
cache_config.decr_mode = HDF5Constants.H5C_decr_off;
H5.H5Pset_mdc_config(fapl_id, cache_config);
cache_config = H5.H5Pget_mdc_config(fapl_id);
assertTrue("H5Pset_mdc_config",
cache_config.version == HDF5Constants.H5AC_CURR_CACHE_CONFIG_VERSION);
assertTrue("H5Pset_mdc_config", cache_config.decr_mode == HDF5Constants.H5C_decr_off);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_mdc_config: " + err);
}
}
@Test
public void testH5P_fapl_core()
{
if (HDF5Constants.H5FD_CORE < 0)
return;
try {
H5.H5Pset_fapl_core(fapl_id, 4096, false);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: core = " + driver_type, HDF5Constants.H5FD_CORE == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_core: " + err);
}
try {
long[] increment = {-1};
boolean[] backingstore = {true};
H5.H5Pget_fapl_core(fapl_id, increment, backingstore);
assertTrue("H5Pget_fapl_core: increment=" + increment[0], increment[0] == 4096);
assertTrue("H5Pget_fapl_core: backingstore=" + backingstore[0], !backingstore[0]);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_core: " + err);
}
}
@Test
public void testH5P_fapl_family()
{
if (HDF5Constants.H5FD_FAMILY < 0)
return;
try {
H5.H5Pset_fapl_family(fapl_id, 1024, HDF5Constants.H5P_DEFAULT);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: family = " + driver_type, HDF5Constants.H5FD_FAMILY == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_family: " + err);
}
try {
long[] member_size = {0};
long[] member_fapl = {-1};
H5.H5Pget_fapl_family(fapl_id, member_size, member_fapl);
assertTrue("H5Pget_fapl_family: member_size=" + member_size[0], member_size[0] == 1024);
assertTrue("H5Pget_fapl_family: member_fapl ",
H5.H5P_equal(member_fapl[0], HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_family: " + err);
}
_createH5familyFile(fapl_id);
deleteH5familyfile();
}
@Test
public void testH5P_family_offset()
{
if (HDF5Constants.H5FD_FAMILY < 0)
return;
try {
H5.H5Pset_fapl_family(fapl_id, 1024, HDF5Constants.H5P_DEFAULT);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: family = " + driver_type, HDF5Constants.H5FD_FAMILY == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_family: " + err);
}
_createH5familyFile(fapl_id);
long family_offset = 512;
try {
H5.H5Pset_family_offset(fapl_id, family_offset);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_family: " + err);
}
try {
long offset = H5.H5Pget_family_offset(fapl_id);
assertTrue("H5Pget_fapl_family: offset=" + offset, offset == family_offset);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_family: " + err);
}
deleteH5familyfile();
}
@Test
public void testH5Pset_fapl_sec2()
{
if (HDF5Constants.H5FD_SEC2 < 0)
return;
try {
H5.H5Pset_fapl_sec2(fapl_id);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: sec2 = " + driver_type, HDF5Constants.H5FD_SEC2 == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_sec2: " + err);
}
_createH5File(fapl_id);
deleteH5file();
}
@Test
public void testH5Pset_fapl_stdio()
{
if (HDF5Constants.H5FD_STDIO < 0)
return;
try {
H5.H5Pset_fapl_stdio(fapl_id);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: stdio = " + driver_type, HDF5Constants.H5FD_STDIO == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_stdio: " + err);
}
_createH5File(fapl_id);
deleteH5file();
}
@Test
public void testH5Pset_fapl_log()
{
if (HDF5Constants.H5FD_LOG < 0)
return;
try {
long log_flags = HDF5Constants.H5FD_LOG_LOC_IO;
H5.H5Pset_fapl_log(fapl_id, H5_LOG_FILE, log_flags, 1024);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: log = " + driver_type, HDF5Constants.H5FD_LOG == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_log: " + err);
}
_createH5File(fapl_id);
deleteH5file();
_deleteLogFile();
}
@Test
public void testH5P_fapl_muti_nulls()
{
if (HDF5Constants.H5FD_MULTI < 0)
return;
int[] member_map = null;
long[] member_fapl = null;
String[] member_name = null;
long[] member_addr = null;
try {
H5.H5Pset_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr, true);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: multi = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_muti: " + err);
}
try {
boolean relax = H5.H5Pget_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr);
assertTrue("H5Pget_fapl_muti: relax ", relax);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_muti: " + err);
}
_createH5multiFile(fapl_id);
deleteH5multifile();
}
@Test
public void testH5P_fapl_muti_defaults()
{
if (HDF5Constants.H5FD_MULTI < 0)
return;
int H5FD_MEM_NTYPES = HDF5Constants.H5FD_MEM_NTYPES; // 7
long sH5FD_MEM_DEFAULT_HADDR = HDF5Constants.H5FD_DEFAULT_HADDR_SIZE;
long sH5FD_MEM_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_SIZE;
long sH5FD_MEM_SUPER_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_SUPER_SIZE;
long sH5FD_MEM_BTREE_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_BTREE_SIZE;
long sH5FD_MEM_DRAW_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_DRAW_SIZE;
long sH5FD_MEM_GHEAP_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_GHEAP_SIZE;
long sH5FD_MEM_LHEAP_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_LHEAP_SIZE;
long sH5FD_MEM_OHDR_HADDR = HDF5Constants.H5FD_MEM_DEFAULT_OHDR_SIZE;
int[] member_map = null;
long[] member_fapl = null;
String[] member_name = null;
long[] member_addr = null;
try {
H5.H5Pset_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr, true);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: multi = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_muti: " + err);
}
try {
member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
boolean relax = H5.H5Pget_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr);
assertTrue("H5Pget_fapl_muti: relax ", relax);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_DEFAULT],
member_map[HDF5Constants.H5FD_MEM_DEFAULT] == HDF5Constants.H5FD_MEM_DEFAULT);
assertTrue("H5Pget_fapl_muti: member_fapl ",
H5.H5P_equal(member_fapl[HDF5Constants.H5FD_MEM_DEFAULT],
HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_DEFAULT],
member_name[HDF5Constants.H5FD_MEM_DEFAULT].compareTo("%s-X.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_SUPER],
member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-s.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_BTREE],
member_name[HDF5Constants.H5FD_MEM_BTREE].compareTo("%s-b.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_DRAW],
member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-r.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DEFAULT],
member_addr[HDF5Constants.H5FD_MEM_DEFAULT] == sH5FD_MEM_HADDR);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_SUPER],
member_addr[HDF5Constants.H5FD_MEM_SUPER] == sH5FD_MEM_SUPER_HADDR);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_BTREE],
member_addr[HDF5Constants.H5FD_MEM_BTREE] == sH5FD_MEM_BTREE_HADDR);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DRAW],
member_addr[HDF5Constants.H5FD_MEM_DRAW] == sH5FD_MEM_DRAW_HADDR);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_GHEAP],
member_addr[HDF5Constants.H5FD_MEM_GHEAP] == sH5FD_MEM_GHEAP_HADDR);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_LHEAP],
member_addr[HDF5Constants.H5FD_MEM_LHEAP] == sH5FD_MEM_LHEAP_HADDR);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_OHDR],
member_addr[HDF5Constants.H5FD_MEM_OHDR] == sH5FD_MEM_OHDR_HADDR);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_muti: " + err);
}
_createH5multiFile(fapl_id);
_createH5multiFileDS();
deleteH5multifile();
}
@Test
public void testH5P_fapl_muti()
{
if (HDF5Constants.H5FD_MULTI < 0)
return;
long HADDR_DEFAULT_SIZE = HDF5Constants.H5FD_DEFAULT_HADDR_SIZE;
int[] member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
long[] member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
String[] member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
long[] member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
for (int mt = HDF5Constants.H5FD_MEM_DEFAULT; mt < HDF5Constants.H5FD_MEM_NTYPES; mt++) {
member_fapl[mt] = HDF5Constants.H5P_DEFAULT;
member_map[mt] = HDF5Constants.H5FD_MEM_SUPER;
}
member_map[HDF5Constants.H5FD_MEM_DRAW] = HDF5Constants.H5FD_MEM_DRAW;
member_map[HDF5Constants.H5FD_MEM_BTREE] = HDF5Constants.H5FD_MEM_BTREE;
member_map[HDF5Constants.H5FD_MEM_GHEAP] = HDF5Constants.H5FD_MEM_GHEAP;
member_name[HDF5Constants.H5FD_MEM_SUPER] = new String("%s-super.h5");
member_addr[HDF5Constants.H5FD_MEM_SUPER] = 0;
member_name[HDF5Constants.H5FD_MEM_BTREE] = new String("%s-btree.h5");
member_addr[HDF5Constants.H5FD_MEM_BTREE] = HADDR_DEFAULT_SIZE / 4;
member_name[HDF5Constants.H5FD_MEM_DRAW] = new String("%s-draw.h5");
member_addr[HDF5Constants.H5FD_MEM_DRAW] = HADDR_DEFAULT_SIZE / 2;
member_name[HDF5Constants.H5FD_MEM_GHEAP] = new String("%s-gheap.h5");
member_addr[HDF5Constants.H5FD_MEM_GHEAP] = (HADDR_DEFAULT_SIZE / 4) * 3;
try {
H5.H5Pset_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr, true);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: multi = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_muti: " + err);
}
try {
boolean relax = H5.H5Pget_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr);
assertTrue("H5Pget_fapl_muti: relax ", relax);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_DEFAULT],
member_map[HDF5Constants.H5FD_MEM_DEFAULT] == HDF5Constants.H5FD_MEM_SUPER);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_DRAW],
member_map[HDF5Constants.H5FD_MEM_DRAW] == HDF5Constants.H5FD_MEM_DRAW);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_BTREE],
member_map[HDF5Constants.H5FD_MEM_BTREE] == HDF5Constants.H5FD_MEM_BTREE);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_GHEAP],
member_map[HDF5Constants.H5FD_MEM_GHEAP] == HDF5Constants.H5FD_MEM_GHEAP);
assertTrue("H5Pget_fapl_muti: member_fapl ",
H5.H5P_equal(member_fapl[HDF5Constants.H5FD_MEM_DEFAULT],
HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DEFAULT],
member_addr[HDF5Constants.H5FD_MEM_DEFAULT] == 0);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_SUPER],
member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-super.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_BTREE],
member_name[HDF5Constants.H5FD_MEM_BTREE].compareTo("%s-btree.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_BTREE],
member_addr[HDF5Constants.H5FD_MEM_BTREE] == HADDR_DEFAULT_SIZE / 4);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_DRAW],
member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-draw.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DRAW],
member_addr[HDF5Constants.H5FD_MEM_DRAW] == HADDR_DEFAULT_SIZE / 2);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_GHEAP],
member_name[HDF5Constants.H5FD_MEM_GHEAP].compareTo("%s-gheap.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_GHEAP],
member_addr[HDF5Constants.H5FD_MEM_GHEAP] == (HADDR_DEFAULT_SIZE / 4) * 3);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_muti: " + err);
}
_createH5multiFile(fapl_id);
try {
long file_size = H5.H5Fget_filesize(H5fid);
assertTrue("H5Pget_fapl_muti: file_size ",
file_size >= HADDR_DEFAULT_SIZE / 4 || file_size <= HADDR_DEFAULT_SIZE / 2);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_muti:H5Fget_filesize " + err);
}
_createH5multiFileDS();
deleteH5multifile();
File file = new File(H5_MULTI_FILE + "-super.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
file = new File(H5_MULTI_FILE + "-btree.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
file = new File(H5_MULTI_FILE + "-draw.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
file = new File(H5_MULTI_FILE + "-gheap.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
}
@Test
public void testH5P_fapl_split()
{
if (HDF5Constants.H5FD_MULTI < 0)
return;
try {
H5.H5Pset_fapl_split(fapl_id, "-meta.h5", HDF5Constants.H5P_DEFAULT, "-raw.h5",
HDF5Constants.H5P_DEFAULT);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: split = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_split: " + err);
}
try {
int[] member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
long[] member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
String[] member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
long[] member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
boolean relax = H5.H5Pget_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr);
assertTrue("H5Pget_fapl_multi: relax ", relax);
assertTrue("H5Pget_fapl_multi: member_name=" + member_name[HDF5Constants.H5FD_MEM_SUPER],
member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-meta.h5") == 0);
assertTrue("H5Pget_fapl_multi: member_name=" + member_name[HDF5Constants.H5FD_MEM_DRAW],
member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-raw.h5") == 0);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_split: " + err);
}
_createH5multiFile(fapl_id);
deleteH5multifile();
File file = new File(H5_MULTI_FILE + "-meta.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
file = new File(H5_MULTI_FILE + "-raw.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
}
@Test
public void testH5P_fapl_direct()
{
if (HDF5Constants.H5FD_DIRECT < 0)
return;
try {
H5.H5Pset_fapl_direct(fapl_id, 1024, 4096, 8 * 4096);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: direct = " + driver_type, HDF5Constants.H5FD_DIRECT == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_direct: " + err);
}
try {
long[] params = {-1, -1, -1};
H5.H5Pget_fapl_direct(fapl_id, params);
assertTrue("H5Pget_fapl_direct: alignment=" + params[0], params[0] == 1024);
assertTrue("H5Pget_fapl_direct: block_size=" + params[1], params[1] == 4096);
assertTrue("H5Pget_fapl_direct: cbuf_size=" + params[2], params[2] == 8 * 4096);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_direct: " + err);
}
_createH5File(fapl_id);
deleteH5file();
}
@Test
public void testH5Pset_fapl_windows()
{
if (HDF5Constants.H5FD_WINDOWS < 0)
return;
try {
H5.H5Pset_fapl_windows(fapl_id);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: windows = " + driver_type, HDF5Constants.H5FD_WINDOWS == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_windows: " + err);
}
_createH5File(fapl_id);
deleteH5file();
}
@Test
public void testH5Pmulti_transform()
{
if (HDF5Constants.H5FD_MULTI < 0)
return;
String f_to_c = "(5/9.0)*(x-32)";
double windchillFread[][] = new double[DIMF_X][DIMF_Y];
double windchillC;
NumberFormat formatter = new DecimalFormat("#0.000");
long HADDRMAX = HDF5Constants.H5FD_DEFAULT_HADDR_SIZE;
int[] member_map = new int[HDF5Constants.H5FD_MEM_NTYPES];
long[] member_fapl = new long[HDF5Constants.H5FD_MEM_NTYPES];
String[] member_name = new String[HDF5Constants.H5FD_MEM_NTYPES];
long[] member_addr = new long[HDF5Constants.H5FD_MEM_NTYPES];
try {
H5.H5Pset_data_transform(plist_id, f_to_c);
H5.H5Pset_btree_ratios(btplist_id, 0.1, 0.5, 0.7);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pdata_transform: " + err);
}
for (int mt = HDF5Constants.H5FD_MEM_DEFAULT; mt < HDF5Constants.H5FD_MEM_NTYPES; mt++) {
member_fapl[mt] = HDF5Constants.H5P_DEFAULT;
member_map[mt] = HDF5Constants.H5FD_MEM_SUPER;
}
member_map[HDF5Constants.H5FD_MEM_DRAW] = HDF5Constants.H5FD_MEM_DRAW;
member_map[HDF5Constants.H5FD_MEM_BTREE] = HDF5Constants.H5FD_MEM_BTREE;
member_map[HDF5Constants.H5FD_MEM_GHEAP] = HDF5Constants.H5FD_MEM_GHEAP;
member_name[HDF5Constants.H5FD_MEM_SUPER] = new String("%s-super.h5");
member_addr[HDF5Constants.H5FD_MEM_SUPER] = 0;
member_name[HDF5Constants.H5FD_MEM_BTREE] = new String("%s-btree.h5");
member_addr[HDF5Constants.H5FD_MEM_BTREE] = HADDRMAX / 4;
member_name[HDF5Constants.H5FD_MEM_DRAW] = new String("%s-draw.h5");
member_addr[HDF5Constants.H5FD_MEM_DRAW] = HADDRMAX / 2;
member_name[HDF5Constants.H5FD_MEM_GHEAP] = new String("%s-gheap.h5");
member_addr[HDF5Constants.H5FD_MEM_GHEAP] = (HADDRMAX / 4) * 3;
try {
H5.H5Pset_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr, true);
long driver_type = H5.H5Pget_driver(fapl_id);
assertTrue("H5Pget_driver: multi = " + driver_type, HDF5Constants.H5FD_MULTI == driver_type);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pset_fapl_muti: " + err);
}
try {
boolean relax = H5.H5Pget_fapl_multi(fapl_id, member_map, member_fapl, member_name, member_addr);
assertTrue("H5Pget_fapl_muti: relax ", relax);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_DEFAULT],
member_map[HDF5Constants.H5FD_MEM_DEFAULT] == HDF5Constants.H5FD_MEM_SUPER);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_DRAW],
member_map[HDF5Constants.H5FD_MEM_DRAW] == HDF5Constants.H5FD_MEM_DRAW);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_BTREE],
member_map[HDF5Constants.H5FD_MEM_BTREE] == HDF5Constants.H5FD_MEM_BTREE);
assertTrue("H5Pget_fapl_muti: member_map=" + member_map[HDF5Constants.H5FD_MEM_GHEAP],
member_map[HDF5Constants.H5FD_MEM_GHEAP] == HDF5Constants.H5FD_MEM_GHEAP);
assertTrue("H5Pget_fapl_muti: member_fapl ",
H5.H5P_equal(member_fapl[HDF5Constants.H5FD_MEM_DEFAULT],
HDF5Constants.H5P_FILE_ACCESS_DEFAULT));
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DEFAULT],
member_addr[HDF5Constants.H5FD_MEM_DEFAULT] == 0);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_SUPER],
member_name[HDF5Constants.H5FD_MEM_SUPER].compareTo("%s-super.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_BTREE],
member_name[HDF5Constants.H5FD_MEM_BTREE].compareTo("%s-btree.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_BTREE],
member_addr[HDF5Constants.H5FD_MEM_BTREE] == HADDRMAX / 4);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_DRAW],
member_name[HDF5Constants.H5FD_MEM_DRAW].compareTo("%s-draw.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_DRAW],
member_addr[HDF5Constants.H5FD_MEM_DRAW] == HADDRMAX / 2);
assertTrue("H5Pget_fapl_muti: member_name=" + member_name[HDF5Constants.H5FD_MEM_GHEAP],
member_name[HDF5Constants.H5FD_MEM_GHEAP].compareTo("%s-gheap.h5") == 0);
assertTrue("H5Pget_fapl_muti: member_addr=" + member_addr[HDF5Constants.H5FD_MEM_GHEAP],
member_addr[HDF5Constants.H5FD_MEM_GHEAP] == (HADDRMAX / 4) * 3);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pget_fapl_muti: " + err);
}
try {
_createH5multiFile(fapl_id);
long file_size = H5.H5Fget_filesize(H5fid);
assertTrue("H5Pget_fapl_muti: file_size ",
file_size >= HADDRMAX / 4 || file_size <= HADDRMAX / 2);
_createH5multiFileDS();
_createFloatDataset();
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pdata_transform: " + err);
}
try {
H5.H5Dwrite(H5Fdid, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
plist_id, windchillF);
H5.H5Dread(H5Fdid, HDF5Constants.H5T_NATIVE_DOUBLE, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
HDF5Constants.H5P_DEFAULT, windchillFread);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5Pdata_transform: " + err);
}
for (int row = 0; row < DIMF_X; row++) {
for (int col = 0; col < DIMF_Y; col++) {
windchillC = (5 / 9.0) * (windchillF[row][col] - 32);
String Cstr = formatter.format(windchillC);
String Fread = formatter.format(windchillFread[row][col]);
assertTrue("H5Pdata_transform: <" + row + "," + col + ">" + Fread + "=" + Cstr,
Fread.compareTo(Cstr) == 0);
}
}
deleteH5multifile();
File file = new File(H5_MULTI_FILE + "-super.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
file = new File(H5_MULTI_FILE + "-btree.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
file = new File(H5_MULTI_FILE + "-draw.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
file = new File(H5_MULTI_FILE + "-gheap.h5");
if (file.exists()) {
try {
file.delete();
}
catch (SecurityException e) {
; // e.printStackTrace();
}
}
}
@Test
public void testH5Fmdc_logging()
{
boolean[] mdc_logging_status = {false, false};
boolean[] mdc_log_options = {false, false};
try {
boolean is_enabled = true;
boolean start_on_access = false;
H5.H5Pset_mdc_log_options(fapl_id, is_enabled, H5_LOG_FILE, start_on_access);
String location = H5.H5Pget_mdc_log_options(fapl_id, mdc_log_options);
assertTrue("H5.H5Pget_mdc_log_options: is_enabled", mdc_log_options[0]);
assertFalse("H5.H5Pget_mdc_log_options: start_on_access_out", mdc_log_options[1]);
H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST,
HDF5Constants.H5F_LIBVER_LATEST);
}
catch (Throwable err) {
err.printStackTrace();
fail("mdc_log_option: " + err);
}
_createH5File(fapl_id);
try {
H5.H5Fget_mdc_logging_status(H5fid, mdc_logging_status);
}
catch (Throwable err) {
fail("H5.H5Fget_mdc_logging_status: " + err);
}
assertTrue("initial: is_enabled", mdc_logging_status[0]);
assertFalse("initial: is_currently_logging", mdc_logging_status[1]);
try {
H5.H5Fstart_mdc_logging(H5fid);
H5.H5Fget_mdc_logging_status(H5fid, mdc_logging_status);
}
catch (Throwable err) {
fail("start H5.H5Fget_mdc_logging_status: " + err);
}
assertTrue("start: is_enabled", mdc_logging_status[0]);
assertTrue("start: is_currently_logging", mdc_logging_status[1]);
try {
H5.H5Fstop_mdc_logging(H5fid);
H5.H5Fget_mdc_logging_status(H5fid, mdc_logging_status);
}
catch (Throwable err) {
fail("stop H5.H5Fget_mdc_logging_status: " + err);
}
// assertFalse("stop: is_enabled", mdc_logging_status[0]);
assertFalse("stop: is_currently_logging", mdc_logging_status[1]);
deleteH5file();
_deleteLogFile();
}
@Test
public void testH5P_evict_on_close()
{
boolean ret_val_id = false;
try {
H5.H5Pset_evict_on_close(fapl_id, true);
ret_val_id = H5.H5Pget_evict_on_close(fapl_id);
assertTrue("H5P_evict_on_close", ret_val_id);
}
catch (HDF5PropertyListInterfaceException err) {
// parallel is not supported
if (err.getMinorErrorNumber() != HDF5Constants.H5E_UNSUPPORTED) {
err.printStackTrace();
fail("H5P_evict_on_close: " + err);
}
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_evict_on_close: " + err);
}
}
@Test
public void testH5P_file_locking()
{
boolean use_file_locking = false;
boolean ignore_disabled_file_locking = false;
try {
// false values (usually not the default)
H5.H5Pset_file_locking(fapl_id, false, false);
use_file_locking = H5.H5Pget_use_file_locking(fapl_id);
ignore_disabled_file_locking = H5.H5Pget_ignore_disabled_file_locking(fapl_id);
assertFalse("H5P_file_locking", use_file_locking);
assertFalse("H5P_file_locking", ignore_disabled_file_locking);
// true values (typically the default)
H5.H5Pset_file_locking(fapl_id, true, true);
use_file_locking = H5.H5Pget_use_file_locking(fapl_id);
ignore_disabled_file_locking = H5.H5Pget_ignore_disabled_file_locking(fapl_id);
assertTrue("H5P_file_locking", use_file_locking);
assertTrue("H5P_file_locking", ignore_disabled_file_locking);
}
catch (HDF5PropertyListInterfaceException err) {
// parallel is not supported
if (err.getMinorErrorNumber() != HDF5Constants.H5E_UNSUPPORTED) {
err.printStackTrace();
fail("H5P_test_file_locking: " + err);
}
}
catch (Throwable err) {
err.printStackTrace();
fail("H5P_test_file_locking: " + err);
}
}
}
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