Commit Graph
47 Commits
Author SHA1 Message Date
Scot Breitenfeld 8d50786f7a Reworked cleaning up API test files (#4626)
* Reworked cleaning up test files, only removing test files if present to account for skipped tests

* changed to using H5Fis_accessible

* update to full use of remove_test_file
2024-07-05 12:38:26 -07:00
Scot Breitenfeld d6541ba8e3 Test fixes for log-based vol (#4618)
* fixes to address failures in the log-based VOL

* moved file cleanup to tests proper

* skipped index API test if not supported
2024-07-02 09:25:15 -05:00
Allen Byrne c548657043 Update and use more URL alias (#4413) 2024-04-17 07:56:19 -05:00
Dana Robinson 0de523bc42 Remove HD macros for C time functions (#4337)
* HDasctime
* HDclock
* HDctime
* HDdifftime
* HDgmtime
* HDlocaltime
* HDmktime
* HDtime
* HDtzset

HDgettimeofday will be done later
2024-04-07 14:09:23 -07:00
bmribler 81c811b721 Fix links md files (#4239) 2024-03-25 10:54:31 -05:00
mattjala e99b0af7e0 Skip vlen IO API test for cache VOL (#4135)
* Fix cache VOL segfault in vlen io test
* Skip vlen IO API test
2024-03-20 10:50:40 -07:00
jhendersonHDF 330b80a266 Add support for _Float16 16-bit floating point type (#4065)
Fixed some conversion issues with Clang due to problematic undefined
behavior when casting a negative floating-point value to an integer

Fixed a bug in the library's software integer to floating-point
conversion function where a user's conversion exception function
returning H5T_CONV_UNHANDLED in the case of overflows would result in
incorrect data after conversion

Added configure checks for functions and macros related to _Float16
usage since some compilers expose the datatype but not the functions or
macros

Fixed a dt_arith test failure when H5_WANT_DCONV_EXCEPTION isn't defined

Fixed a few warnings from not explicitly casting some _Float16 variables
upwards
2024-03-18 21:36:46 -07:00
mattjala c3714b9f15 Fix segfault in vlen io API test (#4130) 2024-03-13 14:55:51 -05:00
mattjala 64a0b71c86 Close and reopen file during dset vlen IO API tests (#4050)
- Close/reopen file and file objects to prevent cache from being used instead of actual I/O.
- Moved vlen io test datasets under the dset container group instead of the root group
- Moved the PASSED() invocation to after individual test cleanup in case an error occurs during H5Treclaim
2024-03-07 09:07:05 -08:00
mattjala 8276bdbe09 Fix VOL-compatibility issues in External Link API test (#4039)
Fix link API tests with incorrect filename
2024-03-04 06:52:44 -08:00
mattjala b79982a606 Fix allocating too much memory in dset API test (#4041) 2024-02-26 14:27:51 -06:00
mattjala 0f56048a04 Test vlen sequence IO in API tests (#4027) 2024-02-21 13:52:39 -06:00
mattjala 4023fbcfbb Add compound subset ops on attributes to API tests (#4005)
* Add partial compound io on attributes to API tests
2024-02-14 11:15:01 -06:00
Sean McBride f309fcebbd Issue #1824: Replaced most remaining sprintf with safer snprint (#4003) 2024-02-13 08:22:17 -06:00
jhendersonHDF 33bb1970b8 Fix build issue and some warnings in H5_api_dataset_test.c (#3998) 2024-02-09 11:05:54 -06:00
mattjala 824bbf5cbe Sync API tests with vol-tests (#3940) 2024-02-06 14:57:50 -06:00
mattjala 853a7c6c9c Fix potential infinite loop in API test (#3960) 2024-01-25 08:57:31 -08:00
mattjala 3d39b85952 Add H5Dread/write_multi to API tests (#3919) 2024-01-05 20:44:27 -06:00
Lori Cooper 2f23f2afe6 Some changes to portal links when they could be found on docs.hdfgroup.org, and changed the helpdesk link to help.hdfgroup.org (#3893)
* Updated some portal links to go directly to docs.hdfgroup. 

* Fixed some portal and help desk links
2023-12-12 22:21:15 -06:00
jhendersonHDF a067bf71f5 Fix configuration issue due to possibly empty CMake variable (#3869) 2023-11-24 06:20:59 -06:00
Allen Byrne 3ea21ccb3e Add HDF5_DISABLE_TESTS_REGEX option to skip tests (#3859) 2023-11-22 07:51:30 -06:00
jhendersonHDF c779464bfe Add GitHub actions for testing VOL connectors (#3849)
* Fix issue with HDF5_VOL_ALLOW_EXTERNAL CMake variable

* Add initial API test workflow

* Initialize parallel testing with MPI_THREAD_MULTIPLE when testing API

* Add CMake variable to allow specifying a VOL connector's package name

* Remove call to MPI_Init in serial API tests

While previously necessary, it now interferes with VOL connectors that
may need to be initialized with MPI_THREAD_MULTIPLE
2023-11-15 08:20:50 -06:00
jhendersonHDF 28d2b6771f HDF5 API test updates (#3835)
* HDF5 API test updates

Removed test duplication from bringing API tests
back into the library from external VOL tests
repo

Synced changes between API tests and library's
tests

Updated API tests CMake code to directly use and
install testhdf5, testphdf5, etc. instead of
creating duplicate binaries

Added new h5_using_native_vol() test function to
determine whether the VOL connector being used
is (or the VOL connector stack being used resolves
to) the native VOL connector

* Remove duplicate variable
2023-11-13 13:49:38 -06:00
Allen Byrne 7631015ea4 Use real URLs and updated names for plugins (#3651)
* synchronize TGZ naming convention/usage
2023-10-10 09:30:19 -05:00
jhendersonHDF 34fcb9c5a4 Fix several spelling/grammar issues (#3621) 2023-10-03 09:01:28 -07:00
Scot Breitenfeld a87ca572fe Replaces HDgetenv with getenv (#3599) 2023-09-26 13:11:22 -07:00
Dana Robinson 44a00ef876 Strip HD prefix from string/char C API calls (#3540)
* Strip HD prefix from string/char C API calls

* HD(f)(put|get)(s|c)
* HDstr*
* HDv*printf
* HD(s)(print|scan)f
* HDperror

But NOT:

* HDstrcase*
* HDvasprintf
* HDstrtok_r
* HDstrndup

As those are not C99 and have portability work-around
implementations. They will be handled later.

* Fix th5_system.c screwup
2023-09-15 15:13:18 -07:00
Dana Robinson 9208697960 Convert hbool_t --> bool in test (#3494) 2023-09-05 13:11:52 -07:00
Sean McBrideandgithub-actions 07df0d252c Fixes the last of the -Wextra-semi-stmt warnings (#3326)
* Fixed extra semi warning by adjusting alternative macro definitions

* Find-replace H5E_END_TRY; -> H5E_END_TRY

* Made H5Epush_goto a do-while loop, fixed indentation

* Made GOTOERROR and ERRMSG do-while loops

* Made Hgoto_error and Hgoto_done  do-while loops

* Made vrfy_cint_type and vrfy_ctype  do-while loops

* Made TEST_TYPE_CONTIG and others do-while loops

* Removed extraneous semi-colons

* Committing clang-format changes

---------

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2023-08-02 17:46:26 -05:00
Larry Knox 0d3617135b Update files to skip list and ignore_words_list (#3321)
* Update files to skip list and ignore_words_list for codespell to not
check files generated by autotools.  Autotools generate misspellings
that can't be fixed in HDF5 code.
2023-08-02 08:39:56 -05:00
Sean McBrideandgithub-actions 553e1cd311 Another round of fixing -Wextra-semi-stmt warnings (#3264)
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2023-07-24 16:18:04 -05:00
Larry Knox 145e962bce Replace support.hdfgroup.org URLs for alternative COPYING file (#3228)
* Replace support.hdfgroup.org URLs for alternative COPYING file
locations in copyright headers with https://www.hdfgroup.org/licenses.
Replace  support.hdfgroup.org URL for alternative COPYING_LBNL_HDF5
with github URL.
Tweak chkcopyright script for change from UICOPYRIGHTSTR to
THGCOPYRIGHTSTR.
2023-07-12 17:33:58 -05:00
Dana Robinson 39e6bf48c9 Remove HD from HDmem* calls (#3211) 2023-06-29 12:33:46 -07:00
Dana Robinson fd933f30b1 Remove programmer/date from comments (#3210)
* Removes Programmer: and Date: fields
* Fixes a few Modifications: fields leftover from previous work
2023-06-29 12:13:29 -07:00
Dana Robinson fd56a593b7 Remove HD from C std lib file ops (#3206)
* HDfclose
* HDferror
* HDfeof
* HDfflush
* HDfopen
* HDfread
* HDfwrite
2023-06-29 08:19:31 -07:00
Dana Robinson 9f430d15b0 Rename HDexit() and related to exit(), etc. (#3202)
* HDatexit
* HDexit
* HD_exit
2023-06-29 08:18:01 -07:00
Dana Robinson aebac33a1f Remove HD from memory allocate/free calls (#3195)
* HDcalloc
* HDfree
* HDmalloc
* HDrealloc
2023-06-28 15:48:12 -07:00
Dana Robinson 187ea8a9ae Rename HD(f)printf() to (f)printf() (#3194) 2023-06-28 08:31:32 -07:00
Dana Robinson 7a44581a84 Rename HDassert() to assert() (#3191)
* Change HDassert to assert

* Fix bin/make_err
2023-06-28 07:31:56 -07:00
Dana Robinsonandgithub-actions 6df077953e Rename HDqsort() to qsort() (#3193)
* Rename HDqsort() to qsort()

* Committing clang-format changes

---------

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2023-06-28 07:30:54 -07:00
Dana Robinson d81e751d41 Remove HDva_(arg|copy|end|start) (#3184) 2023-06-27 17:43:23 -07:00
jhendersonHDF 79bb60c3f6 API test updates (#3018)
* Remove macros from api tests (#2929)
* Remove macros and undefined callbacks (#2959)
* Remove remaining macros from H5_api_tests_disabled.h (#2968)
* Put some vol capability checks in testpar tests and remove remaining warnings (#2995)
* API tests datatype generation cleanup
* Clean up API tests' random datatype generation and fix bug with enum
datatype generation
* Init parallel API tests with MPI_THREAD_MULTIPLE
* HDF5 API tests - Check VOL connector registration
* Determine whether a VOL connector failed to load before running API
tests
* Cleanup some usages of H5VL_CAP_FLAG_CREATION_ORDER in API tests
* Remove some now-unused macros from H5_api_tests_disabled.h
* Enable HDF5 API tests by default
* Implement CMake option to install HDF5 API tests
* Check for invalid AAPL from H5Acreate
* Enable building of VOL connectors alongside HDF5 in CMake
* Prepend CMake VOL URL option indices with 0s so they come in order
* Don't turn on API tests by default yet
* Document VOL connector FetchContent functionality
* Add release note for API test updates
* Only install testing library if API tests are installed
* Fix grammar
2023-05-26 13:29:02 -07:00
Dana Robinson 5c2e434dc6 Fix 'datatype' misspellings ('dataype') (#2984) 2023-05-19 09:05:23 -07:00
Allen Byrne 4b228ec6af Fix CMake generator expression syntax (#2909) 2023-05-05 15:57:40 -05:00
jhendersonHDF a1a5d027a2 Minor tidying of API tests files (#2878)
* Minor tidying of API tests files

* Remove old API test configuration setting
2023-05-03 11:46:31 -05:00
Allen Byrne 571990d5c4 Changes to isolate API Test option files and use fetchcontent (#2880) 2023-05-03 11:45:16 -05:00
jhendersonHDF f8a1b3ceec Add initial version of HDF5 API tests (#2877) 2023-05-02 12:52:39 -07:00