Commit Graph
1114 Commits
Author SHA1 Message Date
Jerome Soumagne 49fe497201 Revert "Merge branch 'hdf5_1_12' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into hdf5_1_12"
This reverts commit 9f9336a5bd, reversing
changes made to 437a1919e7.
2019-12-09 12:16:52 -06:00
Richard Warren 0c06cfc6ef Merged HDFFV-10929_2GB_testing to hdf5_1_12 2019-12-06 16:42:36 -05:00
Jerome Soumagne 383e7f7871 Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim() 2019-10-08 15:19:28 -05:00
Allen Byrne ba974c031d OESS-29 Update HD prefix mostly 2019-08-24 14:07:33 -05:00
Allen Byrne 2bce24576e This test cannot use HD prefix macro with printf of fprintf 2019-08-17 13:33:41 -05:00
Allen Byrne 96bf97f534 Update HD prefix and reconcile hl/cpp test 2019-08-16 13:23:29 -05:00
Allen Byrne 64e6665b54 Add HD prefix to tests 2019-08-15 16:46:15 -05:00
Dana Robinson bb8904a75e Merge pull request #1826 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop
* commit '4227b8948d7091205b4f8dc1271d7dcae01bb0fb':
  Reverts the removal of config/conclude_fc.am while keeping the changes to config/gnu-fflags.
  Fixed a couple of typos.
2019-08-01 09:40:01 -05:00
Dana Robinson 4227b8948d Reverts the removal of config/conclude_fc.am while keeping
the changes to config/gnu-fflags.
2019-07-31 22:51:53 -05:00
Allen Byrne 4df595c22d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'd169391529f253a9903b8e6cacf38c59ceefab07':
  Parallel Fortran tests now use the MPI module instead of including mpif.h.
  First stab at gfortran versions. Tested on gfortran 7-9 so far.
  Moved the -std=f2008 option to gfortran 9 for now.
  Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to   investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated   into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
2019-07-29 16:24:15 -05:00
Dana Robinson d169391529 Merge pull request #1808 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:gnu-flags-work to develop
* commit '7d291d059da6287f769951c4854c566da0b93ce8':
  Parallel Fortran tests now use the MPI module instead of including mpif.h.
  First stab at gfortran versions. Tested on gfortran 7-9 so far.
  Moved the -std=f2008 option to gfortran 9 for now.
  Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to   investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated   into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
2019-07-29 16:13:24 -05:00
Allen Byrne a7d74160d0 Correct generator and add HD prefix 2019-07-26 16:18:39 -05:00
Allen Byrne 6a932198aa HDFFV-10529 Update CMake tests to use test fixtures 2019-07-23 16:24:56 -05:00
Allen Byrne f724e86727 HDFFV-10845 use of TARGETFILE disables auto emulator 2019-07-17 11:58:04 -05:00
Allen Byrne ac5680ce8d HDFFV-10845 add_custom_command requires emulator 2019-07-17 11:58:04 -05:00
Allen Byrne 7ba562a820 HDFFV-10845 fix configure check and PATHs 2019-07-17 11:58:03 -05:00
Dana Robinson 8bd2c81cd5 Updated gfortran options.
* Removed conclude_fc.am, which was causing verbose builds. Need to
  investigate more, though.
* Added gfortran 9 warnings and flags. This will need to be separated
  into other version blocks based on when the options first appeared.
* The standard is now explicitly set at 2008.
2019-07-17 01:23:44 -07:00
Larry Knox 33e9b4526e Use H5DOpen2 in hl/test/test_dset_append.c. 2019-07-11 08:31:02 -05:00
Dana Robinson 097d6037af Cleaned up test_dset_append and enabled the bug1/2 tests. 2019-07-10 04:50:57 -07:00
Quincey Koziol 73df02f13c Merge branch 'develop' into feature/update_gcc_flags 2019-07-09 22:17:22 -05:00
Allen Byrne ae0c16d1f2 HDFFV-10581 fix locations for static pdb files 2019-07-08 12:21:11 -05:00
Quincey Koziol 3b594992d6 Add support for GCC9, update warnhist script, and clean up warnings. 2019-07-02 23:43:45 -05:00
Quincey Koziol d5130bb573 Updated configure & CMake compiler flags for GCC 8.x, along with corresponding
changes to warnhist script (and some extra improvements for condensing C++
and Java warnings), and fixed a bunch of warnings.
2019-06-28 09:10:43 -05:00
Quincey Koziol 1ccbdfee58 Add support for GCC 7.x warnings, update warnhist script to account for them,
clean up warnings.
2019-06-21 10:05:34 -05:00
Allen Byrne c24f11070a Add H5_HLDLL prefix for windows link 2019-06-20 08:54:49 -05:00
Allen Byrne b106b883cc HDFFV-10805 cleanup examples and test code 2019-06-20 06:31:01 -05:00
Allen Byrne e7f16c6f2c HDFFV-10805 Add option to only build shared targets
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
2019-06-18 07:46:25 -05:00
Larry Knox 5385f032dd Modified Makefile.ams for h5repack, h5watch and gif2h5 to allow
disabling tests.
Moved h5cc.in from tools/src/misc to src directory to always create h5cc
whether or not tools are enabled.
Added configuration status of tools and tests to libhdf5.settings.
2019-06-12 10:21:41 -05:00
Larry Knox 54a07f556c Add options to enable or disable building tools and tests. The default
is enabled for each.
2019-06-05 23:20:01 -05:00
Allen Byrne 68bddef35d HDFFV-10741 - remove SKIP_ERRSTK_TESTS option 2019-04-15 14:46:23 -05:00
Quincey Koziol fc945999d0 Merge remote-tracking branch 'origin/develop' into env_vol_load 2019-04-03 17:27:10 -05:00
Allen Byrne 6e2e461087 HDFFV-10741 - add option to skip tool error stack tests 2019-03-26 14:00:34 -05:00
M. Scot Breitenfeld b2423350f4 HDFFV-10738 Wrong INTENT for H5LTread_dataset_double_f
Fixed.

Also fixed INTENT issues for H5DS, H5IM and H5TB when reading or getting.
2019-03-25 10:00:31 -05:00
Quincey Koziol deeb302747 Specify the default VOL connector to use with an environment variable.
This implicitly adds support for changing the VOL connector for command-line
tools or any application linked with the library.

Also, add 'make check-vol' support for all directories, clearing up necessary
issues in testing scripts, etc.
2019-03-09 21:41:38 -06:00
Allen Byrne 122b63a5a2 HDFFV-10703 Update CMake commands to latest standard 2019-02-15 15:48:24 -06:00
Larry Knox 61d3403d12 Remove install-exec-hook from hl/fortran/Makefile.am.
Add check for existing links in hl/fortran/src/Makefile.am.
2019-01-06 21:59:35 -06:00
Larry Knox cceb9f06b8 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '0e34f0feaaeb6d2286f87f695f25fae45c070a42': (26 commits)
  HDFFV-10664 update reference file
  HDFFV-10664 update reference files
  HDFFV-10664 add missing function and check for restriction
  Remove "bad" statements at end of TEST_ERROR.     Formerly arguments to FAIL_PUTS_ERROR
  Add RELEASE.txt entry for HDFFV-10596.
  Add semicolon at end of TEST_ERROR() invocation for consistency.
  Uninstall should remove the libhdf5_hl_fortran links.
  Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran in Makefile.am to match cmake install and the name pattern for other hl lib files.
  Change FAIL_PUTS_ERROR to TEST_ERROR.
  Cleaned up the parallel flush test and set t_pflush1 to always fail. Also set CMake to handle this.
  Update calls: H5Dcreate to H5Dcreate2, H5Acreate to H5Acreate2.
  Removed a comment.
  Fix comment
  Align H5Lcreate_ud behavior with documentation for NULL udata pointer
  Update toolchain comment
  Use c99 standard cmake variable
  Add PGI toolchain
  Correction based on code review.
  HDFFV-10664 add check for state before set call
  HDFFV-10546 refactor variable name
  ...
2019-01-05 07:41:12 -06:00
Larry Knox cc0421291e Uninstall should remove the libhdf5_hl_fortran links. 2019-01-04 08:50:10 -06:00
Larry Knox 30abf02de2 Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran in
Makefile.am to match cmake install and the name pattern for other hl lib
files.

Add missing ';' to test/dsets.c line 13075.
2019-01-04 07:26:15 -06:00
Larry Knox 72124031ec Add libhdf5_hl_fortran symlinks for libhdf5hl_fortran files.
Set ctest*.lsf.in.cmake scripts for sierra.
Correct src/CMakelists.txt syntax error.
2018-12-31 09:20:27 -06:00
Allen Byrne 11b4c1f3af HDFFV-10632 update autotools test scripts to match cmake 2018-12-06 12:48:39 -06:00
Allen Byrne d6de299f01 Need nonexistent file to skip stdout compare 2018-12-04 23:16:03 -06:00
Allen Byrne e3e24a2989 HDFFV-10632 - split stderr and stdout in cmake 2018-12-03 09:35:59 -06:00
M. Scot Breitenfeld cd73b837db HDFFV-10537: Remove installation of Fortran test mod files
Removed from autools install, cmake does not have this issue.
2018-11-09 16:00:34 -06:00
Allen Byrne 2c48f6bd00 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '7db3ea76da5d3b5c237a707b09d1618d3206ba83':
  Makes the installed header files the same between the autotools and CMake.
2018-10-29 11:10:27 -05:00
Dana Robinson 62b92ddf40 Makes the installed header files the same between the autotools
and CMake.

* CMake will no longer install private generated headers and tools
  library headers.
* Several empty public header files (which represent internal packages)
  were removed. These were only installed by CMake.
* Autotools installs will install H5FDwindows.h.

Fixes HDFFV-10614.
2018-10-26 20:44:29 -07:00
Allen Byrne 633b7f93ce TRILAB-81 coverity fixes 2018-10-17 10:57:56 -05:00
Dana Robinson eb78fd8832 Develop normalization with vol_integration.
Mostly peripheral things like the tools and wrappers,
with just enough core library code to support that.
2018-09-18 22:57:37 -07:00
Allen Byrne 27af9a7922 HD prefix and whitespace 2018-08-28 10:54:54 -05:00
Larry Knox d20fd310e4 Change prefix in example scripts to relative path to bin. This was done
for 1.8, and works wherever installed without the need to replace the
original prefix.
2018-08-23 07:37:00 -05:00