Commit Graph
40 Commits
Author SHA1 Message Date
Allen Byrne b26089af1b Fix the HL H5TB fill-info #5332 (#5333) 2025-02-25 14:38:19 -06:00
Allen Byrne 1f62484a93 Updates for updated filters (#5269) 2025-01-24 11:03:03 -06:00
Allen Byrne ca6ceb2f6d Correct some links in doxygen - not found (#5146) 2024-11-26 09:40:08 -06:00
Allen Byrne 778646f506 Update zfp compression lib references (#5141) 2024-11-22 15:44:40 -06:00
Scot Breitenfeld 915a7ab591 fixed true/false and added missing h5_interm_group example (#5092) 2024-11-13 05:18:14 -08:00
Allen Byrne d09ea66934 Rename HDF5_ENABLE_Z_LIB_SUPPORT to HDF5_ENABLE_ZLIB_SUPPORT (#5074) 2024-11-05 15:59:28 -06:00
Allen Byrne ad3ea2633a Move hl example into HDF5Examples (#5057) 2024-11-04 05:22:27 -08:00
jhendersonHDF 90429f5e7d Implement support for complex number datatypes (#4630)
* Implement support for complex number datatypes

Adds the new datatype class H5T_COMPLEX

Adds the new API function H5Tcomplex_create which creates a complex
number datatype from an ID of a base floating-point datatype

Adds the new feature check macros H5_HAVE_COMPLEX_NUMBERS and
H5_HAVE_C99_COMPLEX_NUMBERS

Adds the new datatype size macros H5_SIZEOF_FLOAT_COMPLEX,
H5_SIZEOF_DOUBLE_COMPLEX and H5_SIZEOF_LONG_DOUBLE_COMPLEX

Adds the new datatype ID macros H5T_NATIVE_FLOAT_COMPLEX,
H5T_NATIVE_DOUBLE_COMPLEX, H5T_NATIVE_LDOUBLE_COMPLEX,
H5T_CPLX_IEEE_F16LE, H5T_CPLX_IEEE_F16BE,
H5T_CPLX_IEEE_F32LE, H5T_CPLX_IEEE_F32BE,
H5T_CPLX_IEEE_F64LE and H5T_CPLX_IEEE_F64BE

Adds hard and soft datatype conversion paths between complex number
datatypes and all the integer and floating-point datatypes, as well as
between other complex number datatypes

Adds a special conversion path between complex number datatypes and
array or compound datatypes where the in-memory layout of data is the
same between the datatypes and data can be converted directly

Adds support for complex number datatypes to the h5dump, h5ls and
h5diff/ph5diff tools. Allows h5dump '-m' option to change floating-point
printing format for float complex and double complex datatypes, as well
as long double complex if it has the same size as double complex

Adds minimal support to the h5watch and h5import tools

Adds support for the predefined complex number datatypes and
H5Tcomplex_create function to the Java wrappers. Also adds initial,
untested support to the JNI for future use with HDFView

Adds support for just the H5T_COMPLEX datatype class to the Fortran
wrappers

Adds support for the predefined complex number datatypes and
H5Tcomplex_create function to the high level library H5LT interface
for use with the H5LTtext_to_dtype and H5LTdtype_to_text functions

Changes some usages of "complex" in the library since it conflicts with
the "complex" keyword from the complex.h header. Also changes various
usages of the word "complex" throughout the library to distinguish
compound datatypes from complex datatypes.
2024-10-31 13:54:25 -07:00
Allen Byrne 5425a571e0 Convert develop to v2.0.0 (#5006)
Switches previous 1.16/17/18 values to 2.0
2024-10-27 21:51:07 -07:00
Dana Robinson 7f1e49206d Renamed COPYING to LICENSE (#4978)
This is where most people will expect to find license information. The
COPYING_LBNL_HDF5 file has also been renamed to LICENSE_LBNL_HDF5.
The licenses are unchanged.
2024-10-18 21:13:04 -07:00
Dana Robinson 54f8f12ed9 Update clang-format to 17 (#4931)
Also bump the clang-format GitHub actions to 17
2024-10-04 19:49:35 -07:00
Allen Byrne b5aecf32e2 Correct test script 2024-10-02 19:53:38 -05:00
Allen Byrne 07756c87f5 Update develop to 1.18 API 2024-10-02 19:53:38 -05:00
Allen Byrne 5e94301e71 Add THREADS check to configuration file (#4746)
* Cleanup threads package checks

* Check first if package was found

* Remove unnecessary dependent checks

* Remove Unused options and fix names of option prefix
2024-09-07 20:45:12 -05:00
Allen Byrne f77b70859f Rework Dynamic Analysis and sanitize testing (#4681)
* Ignore predetermined failing test and check pointer before use

* Rework Analysis process
2024-08-05 09:53:53 -05:00
Larry Knox f54abf7032 Remove outdated line from Copyright header in new files. (#4676) 2024-07-29 12:57:36 -05:00
Allen Byrne 6fa09bdb15 Add h5* compiler wrapper testing for CMake #4605 (#4613)
* Add show option

* remove non-static libs and correct names of static libs

* Fixup the pkg-config libs and comp builds

* Fix commands and add fortran pkg-config test scripts

* Add help usage option
2024-07-15 10:16:16 -05:00
Allen Byrne 033f2a8cb5 Add python testing for examples (#4628) 2024-07-12 21:28:38 -07:00
Allen Byrne dca6370691 Move C++ and Fortran and examples to HDF5Examples folder (#4552) 2024-06-08 06:46:09 -05:00
Allen Byrne 69a4e7d68f Correct examples tests to just run under dynamic analysis (#4505) 2024-05-21 07:48:47 -07:00
Allen Byrne f17ca5689e Update for blosc2 in plugins and prefix hdf5 cmake varnames (#4468) 2024-05-10 13:01:28 -05:00
Allen Byrne 9148f7c563 Prepend MPI_TEST_ to parallel example test names (#4306) 2024-04-02 13:01:02 -05:00
Allen Byrne 42f9d2426f Correct reference copy for 16 API (#4244) 2024-03-26 09:04:36 -07:00
bmribler 62a905ae4a Fix URLs (#4210)
Also removed Copyright.html context because it's no longer valid.
2024-03-22 12:06:09 -05:00
Allen Byrne 8f3e544193 Filter plugins updates for registration URL (#4180)
* Update filter plugin URL to new location

* Adjust test array size
2024-03-19 15:11:15 -05:00
jhendersonHDF a56675e12a Fix some minor warnings (#4165) 2024-03-16 19:43:47 -07:00
Allen Byrne 114d2d0211 virtual creates must use the same datatype as the main file (#4092) 2024-03-08 15:50:31 -08:00
Allen Byrne 871a49feca Use H5T_STD_I32LE to create datatype in vds examples (#4070)
Fixes issues when VDS examples are tested on BE systems
2024-03-07 13:05:28 -08:00
Scot Breitenfeld 410c18b59f included best practices of using coll. metadata APIs (#4018) 2024-02-15 08:19:52 -08:00
H. Joe Lee 1414693350 Add C in project line for CMake to fix #4012. (#4014) 2024-02-14 07:38:21 -06:00
jhendersonHDF a4c707a832 Fix incompatible pointer type warnings in object reference examples (#3999) 2024-02-09 11:04:48 -06:00
H. Joe Lee 6345c1650a Remove oneapi/clang compiler printf() type warning. (#3994)
* Remove oneapi/clang compiler printf() type warning from h5ex_t_opaque.c.
2024-02-08 09:56:20 -06:00
Allen Byrne 45ac12e6b6 Explicitly use PROJECT_BINARY_DIR in target copy location (#3974) 2024-01-30 16:21:21 -06:00
Allen Byrne efe7cb72ba Add binary build for linux S3 (#3936)
* Reorg and update options for doc and cmake config

* Correct subfiling depends

* Add linux S3 binaries to GH published files

* Correct path

* Try reducing parallel jobs in tests

* Change examples jobs for test from 8 to 4
2024-01-09 09:47:55 -08:00
Allen Byrne 772276ea1f Remove examples that have been moved to HDF5Examples folder (#3917) 2024-01-03 14:17:46 -06:00
Allen Byrne 366f2d94a3 Add CMake api checks to test the new Examples folder. (#3907)
* Fix missing build-mode value

* Use 110 version file only for the 1.10 library

* Fix H5_LIBVER_DIR variable

* Disable 1.6 API tests for now.
2023-12-22 15:17:05 -06:00
Allen Byrne aa734a5d7e Add VDS examples and fix non-standalone build (#3898)
* Choose a size for rdata dimension

* Fix platform naming conflicts

* Fix doxygen references to point within library repo
2023-12-21 09:53:24 -06:00
Allen Byrne 6f2d22d86e Add variable option syncing for examples (#3885) 2023-12-14 12:50:30 -06:00
Allen Byrne ac650fa9d1 Update examples with 1.6 api and static libs (#3874)
* Update examples with 1.6 api and static libs

* Only check for STATIC only builds

* Do not calculate version as library has already.
2023-11-29 12:54:22 -06:00
Allen Byrne fc88fcde10 Develop merge examples (#3851)
* Merge examples repo into library

* Change grepTest to be more fault-tolerant

* Update examples macro file

* Exclude all Fortran examples from doxygen
2023-11-27 15:30:15 -06:00