39 Commits
Author SHA1 Message Date
jhendersonHDF 0c734cbe80 Fix cache image testing issues and re-enable testing (#6311)
Fix issue where chunked datasets could get setup with an incorrect
chunking index type in parallel HDF5

Fix issue where metadata cache images with an undefined address
and size of 0 couldn't be properly decoded

Fix issue where a flag in H5Cimage.c wasn't getting set correctly
for release builds of the library, leading to incorrect error
checking when reconstructing metadata cache entries
2026-03-27 11:29:18 -05:00
Dana Robinson 7f1e49206d Renamed COPYING to LICENSE (#4978)
This is where most people will expect to find license information. The
COPYING_LBNL_HDF5 file has also been renamed to LICENSE_LBNL_HDF5.
The licenses are unchanged.
2024-10-18 21:13:04 -07:00
jhendersonHDF 34d6ef545a Refactor h5test.c, testframe.c and testpar.h testing frameworks (#4891)
Added new testframe.h header to document testing framework functions and
split them away from h5test.h and from test programs that don't
integrate with the testframe.c testing framework

Added new test setup callback to testframe.c testing framework

Added parameters to AddTest() to specify size of test parameters so they
can be copied for later use

Enabled HDF5 error stacks in testframe.c framework by default and added
some error stack suppressions to some testhdf5 tests

Added new maxthreads option to testframe.c framework to allow specifying
the maximum number of threads a multi-threaded test can use

Moved TestExpress functionality out of testframe.c and into more general
h5test.c for wider use by tests through getter and setter

Updated some tests to not mix and match functionality between h5test.c/h
and testframe.c/h

Moved some functionality from testphdf5.h into testpar.h for parallel
tests that aren't part of testphdf5

Added new parallel test library that contains common shared
functionality for parallel tests (similar to h5test library)
2024-10-01 16:10:03 -05:00
jhendersonHDF 34fcb9c5a4 Fix several spelling/grammar issues (#3621) 2023-10-03 09:01:28 -07:00
Dana Robinson 44a00ef876 Strip HD prefix from string/char C API calls (#3540)
* Strip HD prefix from string/char C API calls

* HD(f)(put|get)(s|c)
* HDstr*
* HDv*printf
* HD(s)(print|scan)f
* HDperror

But NOT:

* HDstrcase*
* HDvasprintf
* HDstrtok_r
* HDstrndup

As those are not C99 and have portability work-around
implementations. They will be handled later.

* Fix th5_system.c screwup
2023-09-15 15:13:18 -07:00
Scot Breitenfeld 117d579c32 Consistent initialization of hid_t in the tests (#3521) 2023-09-08 18:06:23 -05:00
Dana Robinson d24f5d5223 Convert hbool_t --> bool in testpar (#3495) 2023-09-05 11:49:37 -07:00
H. Joe Lee e0083c48e9 chore: fix grammar - get hang -> get hung (#3272) 2023-07-24 14:44:02 -05:00
Dana Robinson fd933f30b1 Remove programmer/date from comments (#3210)
* Removes Programmer: and Date: fields
* Fixes a few Modifications: fields leftover from previous work
2023-06-29 12:13:29 -07:00
Dana Robinson fd56a593b7 Remove HD from C std lib file ops (#3206)
* HDfclose
* HDferror
* HDfeof
* HDfflush
* HDfopen
* HDfread
* HDfwrite
2023-06-29 08:19:31 -07:00
Dana Robinson 9f430d15b0 Rename HDexit() and related to exit(), etc. (#3202)
* HDatexit
* HDexit
* HD_exit
2023-06-29 08:18:01 -07:00
Dana Robinson a5f1fb01b9 Remove some "Programmer" comments (#3209)
These are meaningless noise.

Removes the "Programmer" lines on comment start lines:

    /* Programmer: John Smith

These complicate my sed script that will rip out the rest of
the comments.
2023-06-29 06:33:49 -07:00
Dana Robinson 187ea8a9ae Rename HD(f)printf() to (f)printf() (#3194) 2023-06-28 08:31:32 -07:00
Dana Robinson 7a44581a84 Rename HDassert() to assert() (#3191)
* Change HDassert to assert

* Fix bin/make_err
2023-06-28 07:31:56 -07:00
Quincey Koziolandgithub-actions 0d4a12d7cd Move functions into more focused source code modules (#2936)
* Move functions into more focused source code modules, along with a small #
of directly secondary effects.  No actual changes to the contents of any
moved routines.

Signed-off-by: Quincey Koziol <quincey@koziol.cc>

* Committing clang-format changes

---------

Signed-off-by: Quincey Koziol <quincey@koziol.cc>
Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2023-05-12 14:52:11 -05:00
Quincey Koziol 49a71463a0 Comment cleanup (#2689)
* Clean up content and redundant logging in comments.
2023-04-11 09:41:32 -05:00
Larry Knox 11dfa25910 Update copyright headers (#2184)
* Updated source file copyright headers to remove "Copyright by the Board of Trustees
of the University of Illinois", which is kept in the top-level COPYING file.
2022-11-01 16:02:27 -05:00
luzpaz 174505ca3c Fix typos found in the rest of the hdf5 code-base (#1985)
* Fix typos found in the rest of the hdf5 code-base

* Typo in tool.cmake

* Revert "Typo in tool.cmake"

This reverts commit 06b8403d99.

* Fix clang-format styling
2022-08-10 13:57:26 -07:00
Allen Byrne ae414872f5 Develop clang 13 format (#1933)
* Update format source to clang 13

* More format changes
2022-07-26 14:45:46 -07:00
Sean McBrideandgithub-actions 4ac6ccc021 Snprintf2 (#1399)
* Replaced many uses of sprintf with safer snprintf

Many very straightforward, but in a few cases added a length parameter to some private functions, because buffer length was otherwise unknowable.

* Removed unnecessary use of static on small buffers

This improves thread safety.

* Committing clang-format changes

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2022-01-28 16:43:48 -06:00
f859cb732b Fixed Spelling Errors (#1166)
* fixed missed closing of a dataset

* fixed missed closing of a dataset

* fixed typo in error return

* Committing clang-format changes

* minor edits

* code format

* Committing clang-format changes

* code format

* minor edit

* switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging

* Committing clang-format changes

* changed size_i in printf to reflect the I/O.

* Committing clang-format changes

* Fixed seg fault with xlf on BE with -qintsize=8

* fixed error function string

* spelling corrections via codespell, added new spell check github actions

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* work around for https://github.com/codespell-project/codespell/issues/2137

* misc

* added missing file

* misc

* misc.

* misc

* switch to using Codespell with GitHub Actions

* misc.

* misc.

* fixed more sp errors

* Fix new typos found by codespell.

* fixed proceed with precede

* fixed variable in fortran test

* fixed minnum

* updated spelling list

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
2021-12-07 08:27:29 -06:00
Larry Knox 2ea165efd0 Update license url part2 (#333)
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
    file - files not in src or test.
2021-02-17 08:52:36 -06:00
Quincey Koziol 3ebcfb8bf3 Refactor to avoid using fork to create initial file (#122)
* Refactor to avoid using fork to create initial file

* Use correct exit value on failure
2020-11-25 15:42:53 -06:00
Quincey Koziol 5ff09ae971 Basic alignment with async branch (#115)
* Basic alignment with async branch - trivial changes to reduce clutter in overall diff.

* Update minor error code to reflect change within library

* Update the error output to match library
2020-11-23 10:18:26 -06:00
Allen Byrne b2d661b508 Clang-format of source files 2020-09-30 09:27:10 -05:00
David Young 6486892de5 Fix some HDfprintf compilation errors: use the right format strings
("zu", PRIuHSIZE), avoid casting some printf arguments, pass the right
number of arguments.
2020-09-24 16:34:51 -05:00
Dana Robinson 7dfe176924 Fixed a bug in the cache image code that was introduced by the HD
changes.
2019-08-27 13:26:22 -07:00
Dana Robinson 9a4f86997a Fixed typo from HD changes 2019-08-27 12:20:12 -07:00
Allen Byrne ba974c031d OESS-29 Update HD prefix mostly 2019-08-24 14:07:33 -05:00
Dana Robinson e962df1591 VOL FEATURE 2018-10-10 08:10:15 -07:00
Allen Byrne 08fc36b0ca Correct cutnpaste 2018-03-07 12:23:04 -06:00
Allen Byrne 2db84441d7 ifdef around another function 2018-03-06 16:51:31 -06:00
Allen Byrne e5b602fafe Add #ifdef H5_HAVE_FORK 2018-03-06 15:40:15 -06:00
Allen Byrne 205d33f332 Cleanup overuse of include files 2018-02-14 10:08:09 -06:00
Larry Knox 89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
mainzer afd8f64c29 Omnibus checkin for several relatively minor modifications:
1) Added code test/page_buffer.c to verify that page buffering is
   disabled in parallel builds.

2) Added code to test/cache_image.c to verify correct interaction
   between evict on close and cache image -- in particular management
   of a file containing a cache image containing dirty metadata that
   has been opened R/O.  Also fix for the bug exposed.

3) Added code to testpar/t_cache_image.c to verify expected procedure
   for reading cache images, and also supporting stats collection code
   needed for the test.

4) Repair of an overactive sanity check in H5C__reconstruct_cache_contents().

5) Other minor tidies in passing.

Tested serial and parallel, debug and production on Jelly.
2017-03-28 11:21:40 -05:00
mainzer b7c58f7dfc Minor code changes to address comments in pull request 2017-03-17 04:36:05 -05:00
mainzer 11ce930ae9 Checkin of additions to cache image parallel test code and
associated bug fixes.

Also, modifications to H5PB_dest() to flush the page buffer before
destroying the page buffer.  This is necessary, as when persistant
free space managers are enabled, the page buffer will typically contain
dirty FSM data at page buffer destroy time.

Tested serial/debug, serial/production, serial/check-vfd/debug,
       parallel/debug, parallel/production on Jelly.
2017-03-16 12:42:10 -05:00
Quincey Koziol 0313cbb91d Final merge of page buffering branch to develop 2017-03-13 21:30:37 -07:00