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533 Commits
Author SHA1 Message Date
Allen Byrne b687822541 Add tgz extensions on names (#4255) 2024-03-27 08:03:12 -07:00
H. Joe Lee 967db7f226 Add Julia GitHub Actions. (#4123) 2024-03-27 07:56:18 -05:00
jhendersonHDF fb12776610 Update Windows CI to not install ninja (#4230) 2024-03-26 07:41:01 -05:00
jhendersonHDF db8193def5 Turn on -Werror for Java in GitHub -Werror workflows (#4243) 2024-03-26 07:40:16 -05:00
H. Joe Lee 45ef8fe533 Add markdown link checker action (#4219) 2024-03-25 11:19:34 -05:00
Allen Byrne e2ea0a3ae7 Rework snapshots/release workflows for consistent args (#4227) 2024-03-24 18:10:09 -07:00
H. Joe Lee 23d3d63323 Use tar.gz extension for ABI reports (#4205) 2024-03-21 13:25:45 -05:00
Allen Byrne 0e179d1f60 Add back snapshot names (#4198) 2024-03-21 09:12:50 -07:00
Allen Byrne 58b9cc7ccb last-file.txt should not be created for release workflow (#4185) 2024-03-19 22:04:53 -07:00
jhendersonHDF 87fb6ed653 Add daily VFD CI workflow (#4176) 
Adds testing of Subfiling VFD
 2024-03-19 15:14:36 -05:00
Allen Byrne 8f3e544193 Filter plugins updates for registration URL (#4180) 
* Update filter plugin URL to new location

* Adjust test array size
 2024-03-19 15:11:15 -05:00
Allen Byrne 112f445019 Add cygwin CI and update yaml files for consistency and accuracy (#4131) 
* Add cygwin CI

* add cygwin packages

* Correct option names

* Cleanup yaml file and synch look and feel

* Synch CI look and feel and correct path issues

* Upgrade oneapi version

* pwsh needs env: for vars

* No continuation char for pwsh

* restore correct pwsh step

* Run subset of tests for cygwin workflow

* Remove space chars in regex

* restore full tests
 2024-03-14 07:16:53 -07:00
Allen Byrne fd280df53a Adjust aocc workflow to fit the autotools/cmake pattern of other callable workflows. (#4115) 2024-03-12 03:39:45 -07:00
Allen Byrne cdef27d6ef Correct missing change of source path for S3 build (#4100) 2024-03-09 09:07:08 -08:00
Allen Byrne f87725c203 Merge HDF4 release workflow changes to hdf5 (#4093) 2024-03-08 14:13:10 -08:00
H. Joe Lee 56ea1b50f0 Remove extra whitespaces from nvhpc-cmake action. (#4091) 2024-03-08 12:55:03 -08:00
jhendersonHDF 2a2c683dc3 Don't load toolchain file in CMake workflows (#4077) 2024-03-07 08:03:13 -08:00
Allen Byrne fe5d0d5c53 fix path for S3 build path in CI (#4076) 2024-03-06 07:49:10 -08:00
Allen Byrne 5fc7111895 Add NEWSLETTER and merge abi reports and add sha256sums (#4055) 2024-03-05 14:50:39 -08:00
Allen Byrne 129d80d208 Update INSTALL files (#4052) 2024-03-05 14:42:08 -08:00
dependabot[bot] 21a1d7dfb1 Bump the github-actions group with 2 updates (#4054) 
Bumps the github-actions group with 2 updates: [actions/download-artifact](https://github.com/actions/download-artifact) and [github/codeql-action](https://github.com/github/codeql-action).
 2024-03-04 08:38:11 -06:00
Allen Byrne 9a99fee914 Add deb and rpm binaries to snapshots (#4035) 2024-02-23 07:58:18 -06:00
Allen Byrne 7392a102d8 Delete old snapshot binaries after new snapshots are created (#4020) 2024-02-15 15:32:01 -06:00
Allen Byrne 741c381479 Add hl and cpp ABI reports to daily build (#4006) 
* Add other non-fortran lib abi reports
* removing hl_cpp abi reports because of lack of public symbols
 2024-02-13 08:30:23 -06:00
Allen Byrne 18c7a6c36c remove incorrect check for environ (#4002) 2024-02-09 16:03:33 -06:00
Allen Byrne 0a93152541 Fix overwritten preset names (#4000) 2024-02-09 11:03:33 -06:00
Allen Byrne 6b22af7c43 Add abi-complience check and upload to releases (#3996) 2024-02-08 07:58:08 -06:00
dependabot[bot] 6034d14ccd Bump the github-actions group with 6 updates (#3981) 
Bumps the github-actions group with 6 updates:

| Package | From | To |
| --- | --- | --- |
| [EndBug/add-and-commit](https://github.com/endbug/add-and-commit) | `9.1.3` | `9.1.4` |
| [actions/setup-java](https://github.com/actions/setup-java) | `3` | `4` |
| [ilammy/msvc-dev-cmd](https://github.com/ilammy/msvc-dev-cmd) | `1.12.1` | `1.13.0` |
| [actions/download-artifact](https://github.com/actions/download-artifact) | `4.1.0` | `4.1.1` |
| [actions/cache](https://github.com/actions/cache) | `3` | `4` |
| [github/codeql-action](https://github.com/github/codeql-action) | `3.22.12` | `3.23.2` |


Updates `EndBug/add-and-commit` from 9.1.3 to 9.1.4
- [Release notes](https://github.com/endbug/add-and-commit/releases)
- [Commits](https://github.com/endbug/add-and-commit/compare/1bad3abcf0d6ec49a5857d124b0bfb52dc7bb081...a94899bca583c204427a224a7af87c02f9b325d5)

Updates `actions/setup-java` from 3 to 4
- [Release notes](https://github.com/actions/setup-java/releases)
- [Commits](https://github.com/actions/setup-java/compare/v3...v4)

Updates `ilammy/msvc-dev-cmd` from 1.12.1 to 1.13.0
- [Release notes](https://github.com/ilammy/msvc-dev-cmd/releases)
- [Commits](https://github.com/ilammy/msvc-dev-cmd/compare/v1.12.1...v1.13.0)

Updates `actions/download-artifact` from 4.1.0 to 4.1.1
- [Release notes](https://github.com/actions/download-artifact/releases)
- [Commits](https://github.com/actions/download-artifact/compare/f44cd7b40bfd40b6aa1cc1b9b5b7bf03d3c67110...6b208ae046db98c579e8a3aa621ab581ff575935)

Updates `actions/cache` from 3 to 4
- [Release notes](https://github.com/actions/cache/releases)
- [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md)
- [Commits](https://github.com/actions/cache/compare/v3...v4)

Updates `github/codeql-action` from 3.22.12 to 3.23.2
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](https://github.com/github/codeql-action/compare/012739e5082ff0c22ca6d6ab32e07c36df03c4a4...b7bf0a3ed3ecfa44160715d7c442788f65f0f923)

---
updated-dependencies:
- dependency-name: EndBug/add-and-commit
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: actions/setup-java
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: github-actions
- dependency-name: ilammy/msvc-dev-cmd
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: actions/download-artifact
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: actions/cache
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: github-actions
- dependency-name: github/codeql-action
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2024-02-06 09:09:41 -08:00
Allen Byrne 255ab716f2 Make platform specific test presets for windows and macs (#3988) 
* Enable mac tests

* Add platform test workflows to examples
 2024-02-06 08:11:45 -06:00
Allen Byrne adee148f03 Skip mac bintest until more reliable (#3983) 2024-02-02 10:31:55 -06:00
Allen Byrne 595b5099ea Add binary testing to CI testing (#3971) 
* Add binary test job

* Correct names of jobs

* Add build mode to binary names

* Limit packaging execution

* Make mac DragNDrop optional

* Format if checks

* fix checks for TS

* Allow examples to be packaged

* Correct if NOT format

* Correct configure and workflow call

* Separate out CMake/Autotools Parallel job

* Correct binary examples path

* Correct dir path for windows test

* Correct paths and add extlibs

* Windows binaries do not have a share folder
 2024-01-31 08:13:15 -06:00
Scot Breitenfeld d79667eb0c Add API support for Fortran MPI_F08 module definitions. (#3959) 
* revert to using c-stub for _F08 MPI APIs

* use mpi compiler wrappers for cmake and nvhpc
 2024-01-29 13:13:33 -06:00
Allen Byrne 365e23340c Fix doxygen errors (#3962) 
* Switch warnings as errors to default OFF

* Enable mac docs

* Add doxygen action uses step

* Use html div around snippet

* Allow preset name to be an argument to cmake-ctest.yml
 2024-01-29 07:38:54 -06:00
Yaroslav Halchenko 487d5f0813 RF: move codespell configuration into .codespellrc so could be used locally as well (#3958) 
ATM configuration was embedded within the CI workflow but that makes impossible
to use  codespell  locally since the tool would not find those settings. I moved them
into .codespellrc  but then also removed codespell.yml workflow from skips, added .git and
in general makde it look for .dotfiles too
 2024-01-26 07:59:25 -08:00
Allen Byrne efe7cb72ba Add binary build for linux S3 (#3936) 
* Reorg and update options for doc and cmake config

* Correct subfiling depends

* Add linux S3 binaries to GH published files

* Correct path

* Try reducing parallel jobs in tests

* Change examples jobs for test from 8 to 4
 2024-01-09 09:47:55 -08:00
Allen Byrne d001379f68 Update upload- artifact to match download version (#3929) 
* Update upload- artifact to match download version

* Correct form of action call
 2024-01-08 06:06:40 -08:00
dependabot[bot] 812be1a3bd Bump the github-actions group with 3 updates (#3913) 
(https://github.com/ilammy/msvc-dev-cmd), [actions/download-artifact](https://github.com/actions/download-artifact) and [github/codeql-action](https://github.com/github/codeql-action).
 2024-01-02 07:38:37 -06:00
Allen Byrne 366f2d94a3 Add CMake api checks to test the new Examples folder. (#3907) 
* Fix missing build-mode value

* Use 110 version file only for the 1.10 library

* Fix H5_LIBVER_DIR variable

* Disable 1.6 API tests for now.
 2023-12-22 15:17:05 -06:00
Allen Byrne 773245a084 Disable doxygen as errors for netcdf (#3900) 
* disable building doxygen for netcdf test
 2023-12-20 09:56:32 -06:00
Allen Byrne 5d2d389521 Add intel binaries to daily-build/release workflows (#3895) 2023-12-18 07:50:25 -06:00
Allen Byrne 6f2d22d86e Add variable option syncing for examples (#3885) 2023-12-14 12:50:30 -06:00
dependabot[bot] 184445f4a4 Bump the github-actions group with 4 updates (#3894) 
Bumps the github-actions group with 4 updates: [actions/checkout](https://github.com/actions/checkout), [ossf/scorecard-action](https://github.com/ossf/scorecard-action), [github/codeql-action](https://github.com/github/codeql-action) and [actions/setup-python](https://github.com/actions/setup-python).

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
 2023-12-13 14:02:24 -06:00
Diogo Teles Sant'Anna b7423ffbe5 Feat: Hashpin sensitive dependencies on GitHub Actions and enable Dependabot to update them monthly (#3892) 
* feat: hashpin sensitive dependencies on GHAs

Signed-off-by: Diogo Teles Sant'Anna <diogoteles@google.com>

* feat: enable dependabot for monthly updates on GHA

Signed-off-by: Diogo Teles Sant'Anna <diogoteles@google.com>

---------

Signed-off-by: Diogo Teles Sant'Anna <diogoteles@google.com>
 2023-12-12 22:17:13 -06:00
Lori Cooper 2a43372328 Updated URL in funding.yml (#3882) 
Using new shortened URL, might look better.
 2023-12-04 09:20:14 -08:00
Allen Byrne fc88fcde10 Develop merge examples (#3851) 
* Merge examples repo into library

* Change grepTest to be more fault-tolerant

* Update examples macro file

* Exclude all Fortran examples from doxygen
 2023-11-27 15:30:15 -06:00
Allen Byrne ef39882fa1 Change dest for doxygen (#3856) 
* Switch doxygen refs to hdf5/develop
 2023-11-15 17:32:07 -06:00
Allen Byrne fe49c075ac Fixes for CI and presets (#3853) 2023-11-15 17:31:26 -06:00
jhendersonHDF c779464bfe Add GitHub actions for testing VOL connectors (#3849) 
* Fix issue with HDF5_VOL_ALLOW_EXTERNAL CMake variable

* Add initial API test workflow

* Initialize parallel testing with MPI_THREAD_MULTIPLE when testing API

* Add CMake variable to allow specifying a VOL connector's package name

* Remove call to MPI_Init in serial API tests

While previously necessary, it now interferes with VOL connectors that
may need to be initialized with MPI_THREAD_MULTIPLE
 2023-11-15 08:20:50 -06:00
Allen Byrne 66786fa036 Add intel oneapi windows build to CI CMake (#3836) 2023-11-10 07:36:46 -06:00
H. Joe LeeandLarry Knox 94a992689e Update NVHPC version from 23.7 to 23.9. (#3736) 
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
 2023-11-02 00:11:23 -05:00