Removed code to set JAVA_HOME to a specific directory, which seemed to cause a conflict between the Java version used to compile and the runtime Java version.
* switched from always verbose ctest output to ONLY on test failures
* Windows and macOS builds will skip clang-format check before building documentation
* resolved Doxygen warnings by adding H5G_link_t=H5L_type_t to the DOXYGEN_PREDEFINED list, by adding the macro definition, Doxygen now knows to treat H5G_link_t as H5L_type_
Adds CodeQL workflow for C/C++ analysis with scheduled, manual, and branch-specific triggers, including dependency setup, HDF5 configuration, and SARIF handling.
Setup:
Add JDK 21 setup using actions/setup-java@v5 in arm-main.yml for Windows 11 ARM.
CMake Configuration:
Enable Java build with -DHDF5_BUILD_JAVA=ON in arm-main.yml for Windows 11 ARM.
Fixed#5677
* fixes the GitHub Actions CPack failure on macOS
* Disables Spotlight indexing which can interfere with disk image operations
* Implements retry logic (waits 5 seconds and retries once if CPack fails)
Add generate-index-html.sh script and update workflows to generate and upload index.html files for HDF5 releases, enhancing Maven package testing and deployment.
FFM build requires Java 25, Jextract 25.
Generates FFM bindings during configure.
JNI is default when the requirements are not met or can be forced.
Presets added for maven and FFM - JNI is default selection.
Enhanced Maven options will work with either JNI or FFM
New Workflows for testing and maven uploads.
Extensive documentation changes for java.
- Update NVHPC version from 25.7 to 25.9
- Update CUDA version from 12.9 to 13.0
- Update MPI paths from openmpi4/bin to hpcx/bin
This aligns with the latest NVHPC SDK distribution which uses hpcx for MPI libraries.
* Set UCX_WARN_UNUSED_ENV_VARS to 'n' in workflow
Closes#5917
Behavior:
Modify HDF5UseFortran.cmake to handle cross-compilation by providing default KINDs and sizes when CMAKE_CROSSCOMPILING is true.
Default values for INTEGER and REAL KINDs and their sizes are set when cross-compiling.
Error messages are adjusted to reflect cross-compilation scenarios.
Logic:
Conditional checks added for CMAKE_CROSSCOMPILING to determine if default values should be used.
Default values include INTEGER KINDs {1,2,4,8,16} and REAL KINDs {4,8,10,16}.
Default sizes for native kinds are set to 4 for INTEGER and REAL, and 8 for DOUBLE PRECISION when cross-compiling.
Misc:
Adjustments to verbose messages to indicate when defaults are used during cross-compilation.
Add VOL tests for h5dump, update test generation logic, and modify test configurations.
Tests:
Add VOL tests for h5dump in CMakeTests.cmake and CMakeTestsXML.cmake.
Modify ADD_H5_TEST macro to support VOL-specific tests and filtering.
Add gent_tvms() function in h5dumpgentest.c and h5dumpgentest.h for generating test files.
* Remove NEWSLETTER files.
Update tarball.yml and release-files.yml to upload description for
snapshots and releases.
* Add path to CHANGELOG.md in tarball.yml.
This PR implements an automated release progress monitoring system for the HDF5 project. The changes add a dynamic badge to the README that tracks completion of release-blocking issues from GitHub Project #39, addressing issue #5742. The implementation consists of three components:
- Python script (update-progress.py) that uses GitHub's GraphQL API to query project items, filter for 'Release_Blocker' items, and calculate completion percentage
- GitHub Actions workflow (update-progress.yml) that runs the script every 24 hours, generates badge data, and publishes it via GitHub Gist
- README updates that remove tentative release language and add the new progress badge with color-coded status indicators
The system replaces static release information with real-time progress tracking, providing better transparency into HDF5's feature-driven release process. The badge displays progress percentages with green (90%+), yellow (60-79%), orange (40-59%), and red (<40%) color coding.
Larry Knox
dependabot[bot]
Scot Breitenfeld
H. Joe Lee
William Allen
Allen Byrne
Matt L
Lori Cooper
Dana Robinson