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18 Commits
Author SHA1 Message Date
dependabot[bot] 4fd1bd4545 build(deps): bump the github-actions group with 17 updates (#6588) 
| Package | From | To |
| --- | --- | --- |
| [actions/checkout](https://github.com/actions/checkout) | `7.0.0` | `7.0.1` |
| [lukka/get-cmake](https://github.com/lukka/get-cmake) | `4.3.4` | `4.4.1` |
| [actions/setup-java](https://github.com/actions/setup-java) | `5.4.0` | `5.6.0` |
| [dorny/paths-filter](https://github.com/dorny/paths-filter) | `4.0.1` | `4.0.2` |
| [github/codeql-action/init](https://github.com/github/codeql-action) | `4.36.2` | `4.37.3` |
| [github/codeql-action/analyze](https://github.com/github/codeql-action) | `4.36.2` | `4.37.3` |
| [github/codeql-action/upload-sarif](https://github.com/github/codeql-action) | `4.36.2` | `4.37.3` |
| [codespell-project/actions-codespell](https://github.com/codespell-project/actions-codespell) | `3abb875e3aa9713e40eed5aea082672a42f7f95c` | `3c04c03694eb927ff908b8b5abfe9c58b239b0ae` |
| [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) | `6.2.1` | `6.2.3` |
| [vmactions/freebsd-vm](https://github.com/vmactions/freebsd-vm) | `1.5.0` | `1.5.2` |
| [julia-actions/julia-runtest](https://github.com/julia-actions/julia-runtest) | `1.11.5` | `1.12.0` |
| [lycheeverse/lychee-action](https://github.com/lycheeverse/lychee-action) | `2.8.0` | `2.9.0` |
| [vmactions/openbsd-vm](https://github.com/vmactions/openbsd-vm) | `1.4.4` | `1.4.5` |
| [mpi4py/setup-mpi](https://github.com/mpi4py/setup-mpi) | `1.4.3` | `1.4.4` |
| [softprops/action-gh-release](https://github.com/softprops/action-gh-release) | `3.0.1` | `3.0.2` |
| [ossf/scorecard-action](https://github.com/ossf/scorecard-action) | `2.4.3` | `2.4.4` |
| [actions/setup-python](https://github.com/actions/setup-python) | `6.3.0` | `7.0.0` |
 2026-08-04 10:23:32 -05:00
dependabot[bot]Claude Opus 4.8H. Joe Lee
 		9d5d995bec build(deps): bump the github-actions group with 21 updates (#6500) 
* build(deps): bump the github-actions group with 21 updates

Bumps the github-actions group with 21 updates:

| Package | From | To |
| --- | --- | --- |
| [actions/checkout](https://github.com/actions/checkout) | `4.2.2` | `7.0.0` |
| [DamianReeves/write-file-action](https://github.com/damianreeves/write-file-action) | `1d019960841941be46b139298996df6f139cc7a4` | `d4ee8a06aec5db0c57a036b86f2f428e1f8b00e7` |
| [actions/cache](https://github.com/actions/cache) | `5.0.5` | `6.1.0` |
| [lukka/get-cmake](https://github.com/lukka/get-cmake) | `4.3.3` | `4.3.4` |
| [actions/setup-java](https://github.com/actions/setup-java) | `5.2.0` | `5.4.0` |
| [fortran-lang/setup-fortran](https://github.com/fortran-lang/setup-fortran) | `1.9.0` | `1.9.2` |
| [github/codeql-action/init](https://github.com/github/codeql-action) | `4.36.1` | `4.36.2` |
| [github/codeql-action/analyze](https://github.com/github/codeql-action) | `4.36.1` | `4.36.2` |
| [github/codeql-action/upload-sarif](https://github.com/github/codeql-action) | `4.36.1` | `4.36.2` |
| [codespell-project/actions-codespell](https://github.com/codespell-project/actions-codespell) | `3b7da264292a727fcdc4acdc9eaf9a5abb92ba10` | `3abb875e3aa9713e40eed5aea082672a42f7f95c` |
| [cygwin/cygwin-install-action](https://github.com/cygwin/cygwin-install-action) | `4ef15ca7fd18a18f1000989fcfd968e06d146ce8` | `a3d72946b163026bbd0fa9a88379ccbda4bd86bb` |
| [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) | `6.2.0` | `6.2.1` |
| [vmactions/freebsd-vm](https://github.com/vmactions/freebsd-vm) | `1.4.6` | `1.5.0` |
| [julia-actions/julia-runtest](https://github.com/julia-actions/julia-runtest) | `1.11.4` | `1.11.5` |
| [msys2/setup-msys2](https://github.com/msys2/setup-msys2) | `2.31.1` | `2.32.0` |
| [vmactions/openbsd-vm](https://github.com/vmactions/openbsd-vm) | `1.4.3` | `1.4.4` |
| [mpi4py/setup-mpi](https://github.com/mpi4py/setup-mpi) | `1.4.2` | `1.4.3` |
| [softprops/action-gh-release](https://github.com/softprops/action-gh-release) | `3.0.0` | `3.0.1` |
| [actions/github-script](https://github.com/actions/github-script) | `8.0.0` | `9.0.0` |
| [actions/setup-python](https://github.com/actions/setup-python) | `6.2.0` | `6.3.0` |
| [actions/cache/save](https://github.com/actions/cache) | `5.0.5` | `6.1.0` |


Updates `actions/checkout` from 4.2.2 to 7.0.0
- [Release notes](https://github.com/actions/checkout/releases)
- [Commits](https://github.com/actions/checkout/compare/v4.2.2...v7)

Updates `DamianReeves/write-file-action` from 1d019960841941be46b139298996df6f139cc7a4 to d4ee8a06aec5db0c57a036b86f2f428e1f8b00e7
- [Release notes](https://github.com/damianreeves/write-file-action/releases)
- [Commits](https://github.com/damianreeves/write-file-action/compare/1d019960841941be46b139298996df6f139cc7a4...d4ee8a06aec5db0c57a036b86f2f428e1f8b00e7)

Updates `actions/cache` from 5.0.5 to 6.1.0
- [Release notes](https://github.com/actions/cache/releases)
- [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md)
- [Commits](https://github.com/actions/cache/compare/27d5ce7f107fe9357f9df03efb73ab90386fccae...55cc8345863c7cc4c66a329aec7e433d2d1c52a9)

Updates `lukka/get-cmake` from 4.3.3 to 4.3.4
- [Release notes](https://github.com/lukka/get-cmake/releases)
- [Changelog](https://github.com/lukka/get-cmake/blob/main/RELEASE_PROCESS.md)
- [Commits](https://github.com/lukka/get-cmake/compare/591817e96fcad43505fb4eae36172462abb3a42e...f5b8fbb4d77cec1acc5a5f9f0df4beffaf5d98d9)

Updates `actions/setup-java` from 5.2.0 to 5.4.0
- [Release notes](https://github.com/actions/setup-java/releases)
- [Commits](https://github.com/actions/setup-java/compare/be666c2fcd27ec809703dec50e508c2fdc7f6654...1bcf9fb12cf4aa7d266a90ae39939e61372fe520)

Updates `fortran-lang/setup-fortran` from 1.9.0 to 1.9.2
- [Release notes](https://github.com/fortran-lang/setup-fortran/releases)
- [Commits](https://github.com/fortran-lang/setup-fortran/compare/2a1b9c55897d827a9dfeb114408f3615e53b2b72...195bac823dc6e05bb7c706311ad4540ffc34d5b9)

Updates `github/codeql-action/init` from 4.36.1 to 4.36.2
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](https://github.com/github/codeql-action/compare/87557b9c84dde89fdd9b10e88954ac2f4248e463...8aad20d150bbac5944a9f9d289da16a4b0d87c1e)

Updates `github/codeql-action/analyze` from 4.36.1 to 4.36.2
- [Release notes](https://github.com/github/codeql-action/releases)
- [Changelog](https://github.com/github/codeql-action/blob/main/CHANGELOG.md)
- [Commits](https://github.com/github/codeql-action/compare/87557b9c84dde89fdd9b10e88954ac2f4248e463...8aad20d150bbac5944a9f9d289da16a4b0d87c1e)

Updates `github/codeql-action/upload-sarif` from 4.36.1 to 4.36.2
- [Release notes](https://github.com/github/codeql-action/releases)
- [Commits](https://github.com/github/codeql-action/compare/v4.36.1...v4.36.2)

Updates `codespell-project/actions-codespell` from 3b7da264292a727fcdc4acdc9eaf9a5abb92ba10 to 3abb875e3aa9713e40eed5aea082672a42f7f95c
- [Release notes](https://github.com/codespell-project/actions-codespell/releases)
- [Commits](https://github.com/codespell-project/actions-codespell/compare/3b7da264292a727fcdc4acdc9eaf9a5abb92ba10...3abb875e3aa9713e40eed5aea082672a42f7f95c)

Updates `cygwin/cygwin-install-action` from 4ef15ca7fd18a18f1000989fcfd968e06d146ce8 to a3d72946b163026bbd0fa9a88379ccbda4bd86bb
- [Release notes](https://github.com/cygwin/cygwin-install-action/releases)
- [Commits](https://github.com/cygwin/cygwin-install-action/compare/4ef15ca7fd18a18f1000989fcfd968e06d146ce8...a3d72946b163026bbd0fa9a88379ccbda4bd86bb)

Updates `aws-actions/configure-aws-credentials` from 6.2.0 to 6.2.1
- [Release notes](https://github.com/aws-actions/configure-aws-credentials/releases)
- [Changelog](https://github.com/aws-actions/configure-aws-credentials/blob/main/CHANGELOG.md)
- [Commits](https://github.com/aws-actions/configure-aws-credentials/compare/e7f100cf4c008499ea8adda475de1042d6975c7b...254c19bd240aabef8777f48595e9d2d7b972184b)

Updates `vmactions/freebsd-vm` from 1.4.6 to 1.5.0
- [Release notes](https://github.com/vmactions/freebsd-vm/releases)
- [Commits](https://github.com/vmactions/freebsd-vm/compare/a6de9343ef5747433d9c25784c90e84998b9d69a...5a72679103d223925653750faa878a143340fbd0)

Updates `julia-actions/julia-runtest` from 1.11.4 to 1.11.5
- [Release notes](https://github.com/julia-actions/julia-runtest/releases)
- [Commits](https://github.com/julia-actions/julia-runtest/compare/d60b785c6f2bdf4ebfb18b2b6f7d93b7dfb0efe3...fc07e51ec99db23b29943e95406b5762501e2897)

Updates `msys2/setup-msys2` from 2.31.1 to 2.32.0
- [Release notes](https://github.com/msys2/setup-msys2/releases)
- [Changelog](https://github.com/msys2/setup-msys2/blob/main/CHANGELOG.md)
- [Commits](https://github.com/msys2/setup-msys2/compare/e9898307ac31d1a803454791be09ab9973336e1c...66cd2cce69caa17b53920067426061ca1de3a884)

Updates `vmactions/openbsd-vm` from 1.4.3 to 1.4.4
- [Release notes](https://github.com/vmactions/openbsd-vm/releases)
- [Commits](https://github.com/vmactions/openbsd-vm/compare/fcf799d7ce9c305ad89eabef1fb2fa5c1c42d0ee...18edb32f4e48dae5865d7b8b3a9587bc01218a20)

Updates `mpi4py/setup-mpi` from 1.4.2 to 1.4.3
- [Release notes](https://github.com/mpi4py/setup-mpi/releases)
- [Commits](https://github.com/mpi4py/setup-mpi/compare/dbbb80b116bea57fc1788daf7dbbf7ab3df3a0f1...f200dce75b64188be849b46657dcf86c721937b2)

Updates `softprops/action-gh-release` from 3.0.0 to 3.0.1
- [Release notes](https://github.com/softprops/action-gh-release/releases)
- [Changelog](https://github.com/softprops/action-gh-release/blob/master/CHANGELOG.md)
- [Commits](https://github.com/softprops/action-gh-release/compare/b4309332981a82ec1c5618f44dd2e27cc8bfbfda...718ea10b132b3b2eba29c1007bb80653f286566b)

Updates `actions/github-script` from 8.0.0 to 9.0.0
- [Release notes](https://github.com/actions/github-script/releases)
- [Commits](https://github.com/actions/github-script/compare/ed597411d8f924073f98dfc5c65a23a2325f34cd...3a2844b7e9c422d3c10d287c895573f7108da1b3)

Updates `actions/setup-python` from 6.2.0 to 6.3.0
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](https://github.com/actions/setup-python/compare/a309ff8b426b58ec0e2a45f0f869d46889d02405...ece7cb06caefa5fff74198d8649806c4678c61a1)

Updates `actions/cache/save` from 5.0.5 to 6.1.0
- [Release notes](https://github.com/actions/cache/releases)
- [Changelog](https://github.com/actions/cache/blob/main/RELEASES.md)
- [Commits](https://github.com/actions/cache/compare/27d5ce7f107fe9357f9df03efb73ab90386fccae...55cc8345863c7cc4c66a329aec7e433d2d1c52a9)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-version: 7.0.0
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: github-actions
- dependency-name: DamianReeves/write-file-action
  dependency-version: d4ee8a06aec5db0c57a036b86f2f428e1f8b00e7
  dependency-type: direct:production
  dependency-group: github-actions
- dependency-name: actions/cache
  dependency-version: 6.1.0
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: github-actions
- dependency-name: lukka/get-cmake
  dependency-version: 4.3.4
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: actions/setup-java
  dependency-version: 5.4.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: fortran-lang/setup-fortran
  dependency-version: 1.9.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: github/codeql-action/init
  dependency-version: 4.36.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: github/codeql-action/analyze
  dependency-version: 4.36.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: github/codeql-action/upload-sarif
  dependency-version: 4.36.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: codespell-project/actions-codespell
  dependency-version: 3abb875e3aa9713e40eed5aea082672a42f7f95c
  dependency-type: direct:production
  dependency-group: github-actions
- dependency-name: cygwin/cygwin-install-action
  dependency-version: a3d72946b163026bbd0fa9a88379ccbda4bd86bb
  dependency-type: direct:production
  dependency-group: github-actions
- dependency-name: aws-actions/configure-aws-credentials
  dependency-version: 6.2.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: vmactions/freebsd-vm
  dependency-version: 1.5.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: julia-actions/julia-runtest
  dependency-version: 1.11.5
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: msys2/setup-msys2
  dependency-version: 2.32.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: vmactions/openbsd-vm
  dependency-version: 1.4.4
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: mpi4py/setup-mpi
  dependency-version: 1.4.3
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: softprops/action-gh-release
  dependency-version: 3.0.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: github-actions
- dependency-name: actions/github-script
  dependency-version: 9.0.0
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: github-actions
- dependency-name: actions/setup-python
  dependency-version: 6.3.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: github-actions
- dependency-name: actions/cache/save
  dependency-version: 6.1.0
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: github-actions
...

Signed-off-by: dependabot[bot] <support@github.com>

* ci(zizmor): hash-pin actions/checkout in signed-plugins.yml

Dependabot bumped this reference from the bare tag @v6 to @v7.0.0,
leaving it unpinned. zizmor's blanket policy requires a hash pin,
which failed the code-scanning check with an error. Pin to the same
v7.0.0 commit used across the other workflows.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
 2026-07-02 13:51:49 -05:00
dependabot[bot] 71b4aba68d Bump the github-actions group with 12 updates (#6429) 
| Package | From | To |
| --- | --- | --- |
| [actions/checkout](https://github.com/actions/checkout) | `4` | `6` |
| [lukka/get-cmake](https://github.com/lukka/get-cmake) | `4.3.2` | `4.3.3` |
| [softwareforgood/check-artifact-v4-existence](https://github.com/softwareforgood/check-artifact-v4-existence) | `0.4.1` | `0.4.3` |
| [github/codeql-action](https://github.com/github/codeql-action) | `4.35.3` | `4.36.1` |
| [codespell-project/actions-codespell](https://github.com/codespell-project/actions-codespell) | `cf810cf4cbd6cdefe6ef86e55b64d524a16654a7` | `3b7da264292a727fcdc4acdc9eaf9a5abb92ba10` |
| [azure/trusted-signing-action](https://github.com/azure/trusted-signing-action) | `1.2.0` | `2.0.0` |
| [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) | `6.1.0` | `6.2.0` |
| [vmactions/freebsd-vm](https://github.com/vmactions/freebsd-vm) | `1.4.5` | `1.4.6` |
| [julia-actions/setup-julia](https://github.com/julia-actions/setup-julia) | `3.0.1` | `3.0.2` |
| [vmactions/openbsd-vm](https://github.com/vmactions/openbsd-vm) | `23b3fb94fbb4729a51b1c937f609483e759c8f28` | `fcf799d7ce9c305ad89eabef1fb2fa5c1c42d0ee` |
| [peaceiris/actions-gh-pages](https://github.com/peaceiris/actions-gh-pages) | `4.0.0` | `4.1.0` |
| [adriangl/check-new-commits-action](https://github.com/adriangl/check-new-commits-action) | `1.0.7` | `2.0.1` |
 2026-06-03 12:41:20 -05:00
dependabot[bot] 6e6273e573 Bump the github-actions group with 13 updates (#6393) 
| Package | From | To |
| --- | --- | --- |
| [actions/checkout](https://github.com/actions/checkout) | `6.0.1` | `6.0.2` |
| [actions/upload-artifact](https://github.com/actions/upload-artifact) | `7.0.0` | `7.0.1` |
| [actions/cache](https://github.com/actions/cache) | `5.0.4` | `5.0.5` |
| [lukka/get-cmake](https://github.com/lukka/get-cmake) | `4.3.1` | `4.3.2` |
| [dorny/paths-filter](https://github.com/dorny/paths-filter) | `3.0.2` | `4.0.1` |
| [github/codeql-action](https://github.com/github/codeql-action) | `4.32.4` | `4.35.3` |
| [cygwin/cygwin-install-action](https://github.com/cygwin/cygwin-install-action) | `b09c8ce7e6add6720f12f30042d7c972cf4a75ec` | `4ef15ca7fd18a18f1000989fcfd968e06d146ce8` |
| [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) | `6.0.0` | `6.1.0` |
| [vmactions/freebsd-vm](https://github.com/vmactions/freebsd-vm) | `1.4.4` | `1.4.5` |
| [julia-actions/setup-julia](https://github.com/julia-actions/setup-julia) | `2.7.0` | `3.0.1` |
| [msys2/setup-msys2](https://github.com/msys2/setup-msys2) | `2.31.0` | `2.31.1` |
| [robinraju/release-downloader](https://github.com/robinraju/release-downloader) | `1.12` | `1.13` |
| [softprops/action-gh-release](https://github.com/softprops/action-gh-release) | `2.6.1` | `3.0.0` |
 2026-05-02 07:45:28 -05:00
dependabot[bot] c1fa9a9b8f Bump the github-actions group with 15 updates (#6342) 
Updates the requirements on [actions/checkout](https://github.com/actions/checkout), [actions/download-artifact](https://github.com/actions/download-artifact), [actions/cache](https://github.com/actions/cache), [lukka/get-cmake](https://github.com/lukka/get-cmake), [actions/setup-java](https://github.com/actions/setup-java), [EndBug/add-and-commit](https://github.com/endbug/add-and-commit), [github/codeql-action](https://github.com/github/codeql-action), [advanced-security/filter-sarif](https://github.com/advanced-security/filter-sarif), [codespell-project/actions-codespell](https://github.com/codespell-project/actions-codespell), [azure/trusted-signing-action](https://github.com/azure/trusted-signing-action), [vmactions/freebsd-vm](https://github.com/vmactions/freebsd-vm), [julia-actions/setup-julia](https://github.com/julia-actions/setup-julia), [msys2/setup-msys2](https://github.com/msys2/setup-msys2), [vmactions/openbsd-vm](https://github.com/vmactions/openbsd-vm) and [softprops/action-gh-release](https://github.com/softprops/action-gh-release) to permit the latest version.

* Keep vmactions/openbsd-vm@271a1ba623 # v1.3.4 until ssh doesn't fail with newer version.
 2026-04-07 21:55:50 -05:00
jhendersonHDF ceca851a0d Fix more undefined behavior issues (#6330) 2026-03-31 14:14:18 -05:00
jhendersonHDF ff4eaf31d1 Fix several undefined behavior issues noted by UBsan (#6319) 
Disable float16 support for undefined sanitizer workflow for now as it
causes a crash in UBSan
 2026-03-27 16:08:19 -05:00
jhendersonHDF 5a11a79fc4 Improvements to CMake logic for handling filters (#6287) 
* Re-write zlib/szip CMake logic for clarity

* Update external libaec, zlib-ng and zlib builds to not use patching process

* Add FindZLIBNG module to locate zlib-ng on system

* Rework HDF5 filter plugins support
 2026-03-16 13:46:48 -05:00
dependabot[bot] 9849bda32a Bump the github-actions group with 9 updates (#6255) 
| Package | From | To |
| --- | --- | --- |
| [actions/download-artifact](https://github.com/actions/download-artifact) | `7.0.0` | `8.0.0` |
| [actions/upload-artifact](https://github.com/actions/upload-artifact) | `6.0.0` | `7.0.0` |
| [lukka/get-cmake](https://github.com/lukka/get-cmake) | `4.2.1` | `4.2.3` |
| [fortran-lang/setup-fortran](https://github.com/fortran-lang/setup-fortran) | `1.8.1` | `1.9.0` |
| [github/codeql-action](https://github.com/github/codeql-action) | `4.32.2` | `4.32.4` |
| [azure/trusted-signing-action](https://github.com/azure/trusted-signing-action) | `0.5.11` | `1.1.0` |
| [cygwin/cygwin-install-action](https://github.com/cygwin/cygwin-install-action) | `2566376092c4e280f21131be027af3f5bb2420a4` | `b09c8ce7e6add6720f12f30042d7c972cf4a75ec` |
| [lycheeverse/lychee-action](https://github.com/lycheeverse/lychee-action) | `2.7.0` | `2.8.0` |
| [vmactions/openbsd-vm](https://github.com/vmactions/openbsd-vm) | `1.3.4` | `1.3.6` |
 2026-03-05 11:58:01 -06:00
Scot Breitenfeld a46a399230 Fixes the "multiple @param documentation sections" doxygen warnings (#6195) 
Addresses the "multiple @ param documentation sections" warnings are caused by the interaction of three things:

1. MACRO_EXPANSION = YES with EXPAND_ONLY_PREDEF = NO in Doxyfile.in

2. Versioned API macros in H5version.h like:

\def documentation in APIVersions.dox like:

3. \def H5Tarray_create \api_vers_2{H5Tarray_create,H5Tarray_create1,H5Tarray_create2}

Because Doxygen expands all macros, it sees H5Tarray_create as an alias for H5Tarray_create1. It then associates documentation from both the \def block (for the macro) and the function's own doc block (with \param entries) with the same function — resulting in "multiple @ param documentation sections."

* Update Doxygen version from 1.16.0 to 1.16.1

Use Doxygen 1.16.1 for all platforms. This version includes the latest
bug fixes and improvements while maintaining compatibility with our
documentation format.

* Fix Windows Doxygen installation for version 1.16.1

Handle different Windows binary naming conventions across Doxygen versions:
- 1.16.1 uses: doxygen-VERSION.windows.x64.bin.zip
- 1.16.0 uses: doxygen-VERSION.x64.bin.zip

Try the newer naming convention first, then fall back to the older one
if the download fails. This ensures compatibility across versions.

* Use ssciwr/doxygen-install in setup-doxygen action

Replace direct installation of official Doxygen binaries with
ssciwr/doxygen-install action. This avoids Java documentation parsing
errors that occur with official binaries but not with distribution
builds.

The setup-doxygen action now serves as a thin wrapper around
ssciwr/doxygen-install@f13be16c83 (v1),
using commit hash for security and reproducibility.

* Remove redundant version specification from workflows

The setup-doxygen action already has a default version (1.16.1),
so explicit version specification in workflows is unnecessary.
This follows DRY principles and makes version updates simpler.
 2026-02-12 10:45:17 -06:00
Larry Knox 016e1ddc97 Update ci hdf5config.cmake (#6189) 
Ubuntu Clang tests had problems when using KyleMayes/install-llvm-action to install Clang 18.1 on Ubuntu 24.04, because the Clang that it installed needed libtinfo5 not present in the Ubuntu 24.04 image. However, Clang 18.1.3 is part of the Ubuntu 24.04 image and is used when CMAKE_C_COMPILER and CMAKE_CXX_COMPILER are set to "clang" and "clang++".
 2026-02-03 10:54:39 -06:00
Larry Knox 6ce73cd9f9 Update ci hdf5config.cmake to re-enable GitHub daily tests (#6180) 
Update CI workflows to use symbolic links instead of copying files to re-enable GitHub daily tests.

Workflows:
    Update analysis.yml, cygwin.yml, and par-script.yml to use symbolic links instead of copying CTestScript.cmake and HDF5config.cmake.
    Update par-source.yml and script.yml similarly to use symbolic links for the same files.

Commands:
    Replace cp with ln -s in Linux workflows.
    Replace Copy-Item with New-Item -ItemType SymbolicLink in Windows workflows.

Purpose:
    Re-enable GitHub daily tests:  linked HDF5config.cmake allows CMake to find the HDF5VersionParsing.cmake file to get the HDF5 version.

Also updated runs-on:  ubuntu-22.04 to ubuntu-latest.
 2026-01-29 12:08:40 -06:00
dependabot[bot] 13ee56c5d3 Bump the github-actions group with 11 updates (#6138) 
Bumps the github-actions group with 11 updates:

| Package | From | To |
| --- | --- | --- |
| [actions/checkout](https://github.com/actions/checkout) | `3` | `6` |
| [actions/download-artifact](https://github.com/actions/download-artifact) | `6.0.0` | `7.0.0` |
| [actions/upload-artifact](https://github.com/actions/upload-artifact) | `5.0.0` | `6.0.0` |
| [actions/cache](https://github.com/actions/cache) | `4.3.0` | `5.0.1` |
| [github/codeql-action](https://github.com/github/codeql-action) | `3` | `4` |
| [azure/trusted-signing-action](https://github.com/azure/trusted-signing-action) | `0.5.10` | `0.5.11` |
| [cygwin/cygwin-install-action](https://github.com/cygwin/cygwin-install-action) | `b9bf9147075ee9811ac11beee9351eeb93e2f2fb` | `7d2dc1e241644c3318bed9ec74115d1929baa681` |
| [vmactions/freebsd-vm](https://github.com/vmactions/freebsd-vm) | `1.3.0` | `1.3.4` |
| [msys2/setup-msys2](https://github.com/msys2/setup-msys2) | `2.29.0` | `2.30.0` |
| [vmactions/openbsd-vm](https://github.com/vmactions/openbsd-vm) | `1.2.5` | `1.3.1` |
| [mpi4py/setup-mpi](https://github.com/mpi4py/setup-mpi) | `1.4.0` | `1.4.1` |
 2026-01-02 11:13:52 -06:00
Scot Breitenfeld 21d916841c Changed CI ctest verbose setting (#6136) 
* switched from always verbose ctest output to ONLY on test failures

* Windows and macOS builds will skip clang-format check before building documentation

* resolved Doxygen warnings by adding H5G_link_t=H5L_type_t to the DOXYGEN_PREDEFINED list, by adding the macro definition, Doxygen now knows to treat H5G_link_t as H5L_type_
 2025-12-30 13:16:55 -06:00
William Allen 03d00fb70e Pin GHA dependencies by hash (#6105) 
Hash-pinned dependencies are an important requirement enforced by the OpenSSF scorecard tool: https://github.com/ossf/scorecard/blob/main/docs/checks.md#pinned-dependencies

This commit pins all GitHub Actions workflows to a commit hash.
 2025-12-12 11:23:53 -06:00
dependabot[bot] c46d8b22f6 Bump the github-actions group with 8 updates (#5964) 
Bumps the github-actions group with 8 updates:

| Package | From | To |
| --- | --- | --- |
| [actions/checkout](https://github.com/actions/checkout) | `4.1.7` | `5.0.0` |
| [actions/download-artifact](https://github.com/actions/download-artifact) | `5.0.0` | `6.0.0` |
| [actions/upload-artifact](https://github.com/actions/upload-artifact) | `4` | `5` |
| [KyleMayes/install-llvm-action](https://github.com/kylemayes/install-llvm-action) | `2.0.7` | `2.0.8` |
| [azure/trusted-signing-action](https://github.com/azure/trusted-signing-action) | `0.5.9` | `0.5.10` |
| [lycheeverse/lychee-action](https://github.com/lycheeverse/lychee-action) | `2.6.1` | `2.7.0` |
| [softprops/action-gh-release](https://github.com/softprops/action-gh-release) | `2.3.3` | `2.4.1` |
| [github/codeql-action](https://github.com/github/codeql-action) | `3.30.5` | `4.31.2` |
 2025-11-03 07:39:54 -06:00
dependabot[bot] 2448f9b9bd Bump the github-actions group with 12 updates (#5891) 
Bumps the github-actions group with 12 updates:

| Package | From | To |
| --- | --- | --- |
| [actions/checkout](https://github.com/actions/checkout) | `4` | `5` |
| [actions/download-artifact](https://github.com/actions/download-artifact) | `4.3.0` | `5.0.0` |
| [actions/cache](https://github.com/actions/cache) | `3` | `4` |
| [actions/setup-java](https://github.com/actions/setup-java) | `4` | `5` |
| [aws-actions/configure-aws-credentials](https://github.com/aws-actions/configure-aws-credentials) | `4` | `5` |
| [lycheeverse/lychee-action](https://github.com/lycheeverse/lychee-action) | `2.0.2` | `2.6.1` |
| [jlumbroso/free-disk-space](https://github.com/jlumbroso/free-disk-space) | `1.3.0` | `1.3.1` |
| [robinraju/release-downloader](https://github.com/robinraju/release-downloader) | `1.11` | `1.12` |
| [softprops/action-gh-release](https://github.com/softprops/action-gh-release) | `2.3.2` | `2.3.3` |
| [ossf/scorecard-action](https://github.com/ossf/scorecard-action) | `2.4.2` | `2.4.3` |
| [github/codeql-action](https://github.com/github/codeql-action) | `3.29.7` | `3.30.5` |
| [actions/setup-python](https://github.com/actions/setup-python) | `4` | `6` |
 2025-10-02 06:42:14 -05:00
Dana Robinson 683f80ac4b Remove 'cmake' from GitHub workflow yml filenames (#5824) 
Now that we are CMake-only, there is no need to use cmake in the
GitHub CI yml filenames.
 2025-09-14 20:40:39 -05:00